g.arboreum_cottongen_reftransV1_0006523, g.arboreum_cottongen_reftransV1_0006523 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0006523
Unique Nameg.arboreum_cottongen_reftransV1_0006523
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length751
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr9chromosomeg.arboreum_cottongen_reftransV1_0006523:1..751 .
Chr9:62165428..62167137 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: G7IKB9_MEDTR (Trichome birefringence-like protein OS=Medicago truncatula GN=MTR_2g015720 PE=4 SV=1)

HSP 1 Score: 418.698 bits (1075), Expect = 1.319e-143
Identity = 195/249 (78.31%), Postives = 216/249 (86.75%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN KT+F+R+   S V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI  GNAW GMD+L+FNSWHWWTHKG SQGWDYIRDGS L K+M+RL AYNKGL TWA WVD NVD TKTKVFFQGISPTHY G+EWNQPK SC G+ EPLSG+TY AG PP++ I+N VL SM  PVYLLDIT LSQLRKDAHPS+YSGDH+GNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  109 KIMFVGDSLSLNMWESLSCMIHASVPNVKTSFLRREAQSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLVFNSWHWWTHKGSSQGWDYIRDGSKLVKNMDRLVAYNKGLTTWAKWVDLNVDPTKTKVFFQGISPTHYMGKEWNQPKNSCSGQLEPLSGSTYPAGLPPSSNILNNVLKSMKSPVYLLDITLLSQLRKDAHPSSYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 357          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: D7KDP8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473111 PE=4 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 2.924e-142
Identity = 189/250 (75.60%), Postives = 224/250 (89.60%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGG-NAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            ++MFVGDSLSLNMWES+ACMIHASVPN+KTTF++++PLS + F++YGVTL+LYRTPY+VDI KE VG VLNLG+I+GG NAW  MD+L+FNSWHWWTHKG+SQGWDYIRDGS+L +DMNRL+A+ KGL+TWA WVD NVD TKT+VFFQGISPTHYEGREWN+P+KSC G+ +PL G++Y +G PP+A +V+KVL SM KPV LLDITTLSQLRKDAHPS+Y GD  G DCSHWCLPGLPDTWNQLLYAA
Sbjct:  129 RVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLSTLTFQEYGVTLHLYRTPYIVDISKEKVGRVLNLGAIEGGANAWKNMDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTTKTRVFFQGISPTHYEGREWNEPRKSCSGQMQPLGGSSYPSGQPPSAGVVSKVLNSMKKPVTLLDITTLSQLRKDAHPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 377          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: B9S988_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1014620 PE=4 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 2.955e-142
Identity = 194/249 (77.91%), Postives = 219/249 (87.95%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN+KT+ V +  L  V F++Y VTLY++RTPYLVDIV+E+VG VL L SI+GGNAW GMDLLIFNSWHWWTH G+SQ WDY+R G++LYKDM+RLEA+ +G++TWA WVD NVD  KTKVFFQGISPTHYEGREWNQPKKSC GE EPLSG+TY  GAPPA A+VNKVL ++ KPVYLLDITTLSQLRKDAHPSTY GD SG DCSHWCLPGLPDTWNQLLYAA
Sbjct:  120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVDIVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQPWDYVRAGASLYKDMDRLEAFYRGMSTWAKWVDQNVDPAKTKVFFQGISPTHYEGREWNQPKKSCNGEAEPLSGSTYPGGAPPAVAVVNKVLSTIKKPVYLLDITTLSQLRKDAHPSTY-GDGSGTDCSHWCLPGLPDTWNQLLYAA 367          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V4W906_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015687mg PE=4 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 3.243e-142
Identity = 193/249 (77.51%), Postives = 217/249 (87.15%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK  LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G  W  MD+LIFNSWHWWTH GK+Q WDYI+DG  L KDM+RLEA+ KG++TWA WVD NVD +KTKVFFQGISPTHY+G+EWN  KK+C GE EPLSG+TY  G PPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG+HSG DCSHWCLPGLPDTWNQLLYAA
Sbjct:  115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWEDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSKTKVFFQGISPTHYKGKEWNSRKKNCLGELEPLSGSTYPGGVPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGEHSGTDCSHWCLPGLPDTWNQLLYAA 363          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0D2Q634_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G088800 PE=4 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 4.011e-142
Identity = 205/264 (77.65%), Postives = 219/264 (82.95%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWD---------------YIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ACM+ ASVPNSKTT+VRK PLSFVIFEDYGVTLY+YRTPYLVDIV+E VG VLNLGSI GGNAW GMDLLIFN+WHWWTHKG+SQ +D                I     LY+DM+RL A+NKGL TWANWVD NVD   TKVFFQGISPTHYEGREWNQP K+C GE EPLSG TY AGAPPA A+VNKVLG+M KPVYLLDITTLSQLRKDAHPSTY G  SGNDCSHWCLPGLPDTWN LLYAA
Sbjct:  115 KIMFVGDSLSLNMWESLACMVQASVPNSKTTYVRKDPLSFVIFEDYGVTLYMYRTPYLVDIVRETVGAVLNLGSINGGNAWKGMDLLIFNTWHWWTHKGQSQAYDSYHLIFHLIIMIMIVKICFYVELYEDMDRLVAFNKGLTTWANWVDNNVDPNITKVFFQGISPTHYEGREWNQPNKNCNGELEPLSGPTYPAGAPPAVAVVNKVLGTMKKPVYLLDITTLSQLRKDAHPSTYGG-LSGNDCSHWCLPGLPDTWNHLLYAA 377          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V7C6G6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G058400g PE=4 SV=1)

HSP 1 Score: 414.461 bits (1064), Expect = 9.315e-142
Identity = 190/249 (76.31%), Postives = 215/249 (86.35%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            +IMFVGDSLSLNMWES++CM+HASVPN+ TTFVR+  LS V F++Y VT+ LYRTPYLVDIV+E VG VL L SI+ GNAWIG+D+LIFNSWHWWTH G SQGWDYIRDGS+L KDM+RLEA+NKG++TW  WVD N+D TKTKVFFQGISPTHY+G+EWN+P+KSC GE EPL G+TY AG PPAA IVN VL  M   VYLLDIT LSQLRKDAHPS YSGDH+GNDCSHWCLPGLPDTWNQLL AA
Sbjct:  113 RIMFVGDSLSLNMWESLSCMLHASVPNATTTFVRREALSTVTFQEYEVTIELYRTPYLVDIVREEVGRVLTLDSIQAGNAWIGLDMLIFNSWHWWTHTGNSQGWDYIRDGSSLLKDMDRLEAFNKGMSTWGEWVDENIDPTKTKVFFQGISPTHYQGQEWNEPRKSCSGELEPLGGSTYPAGLPPAANIVNTVLKKMKNKVYLLDITLLSQLRKDAHPSAYSGDHAGNDCSHWCLPGLPDTWNQLLNAA 361          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A059C813_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02713 PE=4 SV=1)

HSP 1 Score: 414.461 bits (1064), Expect = 1.158e-141
Identity = 190/249 (76.31%), Postives = 216/249 (86.75%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVP +KT+F RK  LS V F DYGV+++LYRTPYLVDIV+EN+G VL L SI+ G +W GMD+LIFNSWHWWTH GKSQ WDYI+DG  + KDM+RL AY KGL+TWA WVD NVD +KTKVFFQGISPTHY+G++W+ PKK+C GEQ PLSG+TY  GAPPA ++V+KVL SM  PVYLLDITTLSQLRKDAHPSTYSGDHSG DCSHWCLPGLPDTWNQLLYAA
Sbjct:  122 KIMFVGDSLSLNMWESLSCMIHASVPGAKTSFARKESLSAVTFPDYGVSIFLYRTPYLVDIVRENIGRVLKLDSIEAGKSWQGMDVLIFNSWHWWTHTGKSQPWDYIQDGGRVVKDMDRLSAYYKGLSTWAKWVDLNVDSSKTKVFFQGISPTHYQGKDWHSPKKNCMGEQSPLSGSTYPTGAPPATSVVSKVLNSMKTPVYLLDITTLSQLRKDAHPSTYSGDHSGTDCSHWCLPGLPDTWNQLLYAA 370          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067GGP0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017263mg PE=4 SV=1)

HSP 1 Score: 414.075 bits (1063), Expect = 1.295e-141
Identity = 193/249 (77.51%), Postives = 216/249 (86.75%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK  LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G  W  MD+LIFNSWHWWTH GK+Q WDYI+DG  L KDM+RLEA+ KG++TWA WVD NVD ++TKVFFQGISPTHY G+EWN  KK+C GE EPLSG+TY  GAPPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDTWNQLLYAA
Sbjct:  115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAA 363          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B0MHT1_GOSAR (Transmembrane protein OS=Gossypium arboreum GN=F383_12303 PE=4 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 1.372e-140
Identity = 205/249 (82.33%), Postives = 220/249 (88.35%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ACM+ ASVPNSKTT+VR+ PLSF    DYGVTLY+YRTPYLVDIV+E VG VLNLGSI GGNAW GMDLLIFN+WHWWTHKG+SQ WDYIRDGS +Y+DM+RL A+NKGL TWANWVD NVD   TKVFFQGISPTHYEGREWNQP K+C GE EPLSG TY AGAPPAAA+VNKVLG+M  PVYLLDITTLSQLRKDAHPSTY G  SGNDCSHWCLPGLPDTWN LLYAA
Sbjct:   34 KIMFVGDSLSLNMWESLACMVQASVPNSKTTYVRRDPLSF----DYGVTLYMYRTPYLVDIVRETVGAVLNLGSINGGNAWKGMDLLIFNTWHWWTHKGQSQAWDYIRDGSEVYEDMDRLVAFNKGLTTWANWVDNNVDPNITKVFFQGISPTHYEGREWNQPNKNCNGELEPLSGPTYPAGAPPAAAVVNKVLGTMKNPVYLLDITTLSQLRKDAHPSTYGG-LSGNDCSHWCLPGLPDTWNHLLYAA 277          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V4KRM9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007896mg PE=4 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 2.201e-140
Identity = 187/250 (74.80%), Postives = 220/250 (88.00%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGG-NAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            ++MFVGDSLSLNMWES+ CMIHASVPN+KTTF++++PLS + F++YGVTLYLYRTPY+VDI KE VG VLNLG+I GG N W  MD+L+FNSWHWWTHKG+SQGWDYIRDGS+L +DMNRL+A+ KGL TWA WVD NVD ++TKVFFQGISPTHYEGREWN+P+KSC G+ +PLSG+ Y +G PP+A +V+KVL +M KPV+LLDITTLSQLRKDAHPS Y GD  G DCSHWCLPGLPDTWNQLLYAA
Sbjct:  135 RVMFVGDSLSLNMWESLGCMIHASVPNAKTTFLKRTPLSTLTFQEYGVTLYLYRTPYIVDISKEKVGRVLNLGAIDGGANLWKNMDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLTTWARWVDQNVDTSRTKVFFQGISPTHYEGREWNEPRKSCNGQAQPLSGSNYPSGQPPSAGVVSKVLNAMRKPVFLLDITTLSQLRKDAHPSIYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 383          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL8_ARATH (Protein trichome birefringence-like 8 OS=Arabidopsis thaliana GN=TBL8 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.211e-46
Identity = 97/273 (35.53%), Postives = 142/273 (52.01%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-VRKSPLS------FVIFEDYGVTLYLYRTPYLVDI----------VKENVG-DVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSM---NKPVYLLDITTLSQLRKDAHPSTY----SGDHSGNDCSHWCLPGLPDTWNQLLYA 749
            +I+FVGDS+  N WES+ CM+  +V N    + V  +P+S       + F +  +T+  +RTP+LV +          VK  V  D  N  S K    W+G D+L+FN+ HWW          Y ++G  L K M  +E + K L TW +WV   +D  ++ VFF+  SP HY    WN     C  + EP +        P     +++ +  M   +  V  L+IT L++ RKDAHPS Y    + + +  DCSHWCLPG+PDTWN++LYA
Sbjct:  150 RIVFVGDSIGRNQWESLLCMLSQAVSNKSEIYEVNGNPISKHKGFLSMRFPEQNLTVEYHRTPFLVVVGRPPENSPVDVKMTVRVDEFNWQSKK----WVGSDVLVFNTGHWWNEDKTFIAGCYFQEGGKLNKTMGVMEGFEKSLKTWKSWVLERLDSERSHVFFRSFSPVHYRNGTWNL-GGLCDADTEPETDMKKMEPDPIHNNYISQAIQEMRYEHSKVKFLNITYLTEFRKDAHPSRYREPGTPEDAPQDCSHWCLPGVPDTWNEILYA 417          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL3_ARATH (Protein trichome birefringence-like 3 OS=Arabidopsis thaliana GN=TBL3 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.778e-46
Identity = 87/272 (31.99%), Postives = 142/272 (52.21%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVD------IVKENVGDVLNLGSIKG-GNAWIGMDLLIFNSWHWWTHKGKSQG-WDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKS-CYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY--------SGDHSGN-----DCSHWCLPGLPDTWNQLLYA 749
            +++FVGDSL  + WES  C++ + +P  + +  R         ++Y  T+  Y  PY+V+      ++ +    ++ + S+K     W G D+L+FN++ WW    + +  W    +G +  + ++   AY  GL TWANWVD+ VD  KT+VFF  +SPTH    +W +P  + C+ E +P+    +           +V+ V+  M   V +++IT LS+ R DAH S Y        + +   +     DC HWCLPGLPDTWN++L A
Sbjct:  161 RLLFVGDSLQRSQWESFVCLVESIIPEGEKSMKRSQKYFVFKAKEYNATIEFYWAPYIVESNTDIPVISDPKKRIVKVDSVKDRAKFWEGADILVFNTYVWWMSGLRMKALWGSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPNGTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVYTETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLA 432          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL33_ARATH (Protein trichome birefringence-like 33 OS=Arabidopsis thaliana GN=TBL33 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.729e-44
Identity = 95/275 (34.55%), Postives = 142/275 (51.64%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVD------IVKENVGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLE-----AYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW-NQPKKSCYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGD------------HSGNDCSHWCLPGLPDTWNQLLYA 749
            ++M+VGDSL+  M+ SM C++H  +P  + +      L+    ++Y  T+  Y  P+L++      IV      V+  GSI K G  W G+D++IFN++ WW    K      I  GS   K+ N +E     AY  G+ +   WV  N+D+ KT+VFF  +SPTH +G +W  +P ++CY +   +   +Y           ++ +V G    P+ LL+IT +S  RKDAH S Y                S  DC HWCLPGL DTWN+LL+A
Sbjct:  150 RMMYVGDSLNRGMFVSMICLLHRLIPEDQKSIKTNGSLTVFTAKEYNATIEFYWAPFLLESNSDDAIVHRISDRVVRKGSINKHGRHWKGVDIIIFNTYLWWMTGLKMN----ILQGSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGEPGQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSIYKKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFA 420          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL10_ARATH (Protein trichome birefringence-like 10 OS=Arabidopsis thaliana GN=TBL10 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 3.553e-44
Identity = 94/274 (34.31%), Postives = 146/274 (53.28%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-VRKSPLS----FVIF--EDYGVTLYLYRTPYLVDIVKENVGD------VLNLGSIK-GGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAP-PAAAIVNKVLG-----SMNKPVYLLDITTLSQLRKDAHPSTYS-GDHS-----GNDCSHWCLPGLPDTWNQLLYA 749
            +++FVGDS+  N WES+ C++ ++V N    + +  SP++    F++F  E+Y  T+  YR+P+LV   +  +G        L L ++    + W   D+L+ N+ HWW     ++   Y ++G  +   MN  +AY + L T   W+ T +D  KT+VFF+  +P H+ G +W +   +C+ E  P  GT+  +        I+  VL      S    V LL+IT ++  RKD HPS Y  G H        DCSHWCLPG+PDTWN+L YA
Sbjct:  171 RLVFVGDSIGRNQWESLLCLLSSAVKNESLIYEINGSPITKHKGFLVFKFEEYNCTVEYYRSPFLVPQSRPPIGSPGKVKTSLKLDTMDWTSSKWRDADVLVLNTGHWWNEGKTTRTGCYFQEGEEVKLKMNVDDAYKRALNTVVKWIHTELDSNKTQVFFRTFAPVHFRGGDW-KTGGTCHMETLPEIGTSLASSETWEQLKILRDVLSHNSNRSETVKVKLLNITAMAAQRKDGHPSLYYLGPHGPAPLHRQDCSHWCLPGVPDTWNELFYA 443          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL32_ARATH (Protein trichome birefringence-like 32 OS=Arabidopsis thaliana GN=TBL32 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.088e-43
Identity = 95/274 (34.67%), Postives = 143/274 (52.19%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKEN-----VGD-VLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWD-YIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW-NQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGS-----MNKPVYLLDITTLSQLRKDAHPSTY------------SGDHSGNDCSHWCLPGLPDTWNQLLYA 749
            K+MFVGDSL+  M+ S+ C++H+ +P +  +      L+    +DY  T+  Y  P+L++   +N     V D ++  GSI K G  W G D+++FN++ WW    K +  +   +D      +M   +AY   L T   WV  N+D  KT+VFF  +SPTHY+G +W  +  K+CY +  P+    +       +  + KV+G         PV +L+IT LS  RKDAH S Y            +   S +DC HWCLPGL DTWN+L +A
Sbjct:  175 KMMFVGDSLNRGMYVSLICLLHSQIPENSKSMDTFGSLTVFSLKDYNATIEFYWAPFLLESNSDNATVHRVSDRIVRKGSINKHGRHWRGADIVVFNTYLWWRTGFKMKILEGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGEQGKNCYNQTTPIQDMNHWPSD--CSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTSIYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFA 446          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7IKB9_MEDTR1.319e-14378.31Trichome birefringence-like protein OS=Medicago tr... [more]
D7KDP8_ARALL2.924e-14275.60Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9S988_RICCO2.955e-14277.91Putative uncharacterized protein OS=Ricinus commun... [more]
V4W906_9ROSI3.243e-14277.51Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A0D2Q634_GOSRA4.011e-14277.65Uncharacterized protein OS=Gossypium raimondii GN=... [more]
V7C6G6_PHAVU9.315e-14276.31Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A059C813_EUCGR1.158e-14176.31Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A067GGP0_CITSI1.295e-14177.51Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A0B0MHT1_GOSAR1.372e-14082.33Transmembrane protein OS=Gossypium arboreum GN=F38... [more]
V4KRM9_EUTSA2.201e-14074.80Uncharacterized protein OS=Eutrema salsugineum GN=... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
TBL8_ARATH6.211e-4635.53Protein trichome birefringence-like 8 OS=Arabidops... [more]
TBL3_ARATH6.778e-4631.99Protein trichome birefringence-like 3 OS=Arabidops... [more]
TBL33_ARATH1.729e-4434.55Protein trichome birefringence-like 33 OS=Arabidop... [more]
TBL10_ARATH3.553e-4434.31Protein trichome birefringence-like 10 OS=Arabidop... [more]
TBL32_ARATH1.088e-4334.67Protein trichome birefringence-like 32 OS=Arabidop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026057PC-EsterasePFAMPF13839PC-Esterasecoord: 1..246
e-value: 5.7E-86
score: 288.6
IPR029986Protein trichome birefringence-like 37/38PANTHERPTHR32285:SF15PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATEDcoord: 1..247
IPR029962Trichome birefringence-like familyPANTHERPTHR32285FAMILY NOT NAMEDcoord: 1..247

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0006523 ID=g.arboreum_cottongen_reftransV1_0006523; Name=g.arboreum_cottongen_reftransV1_0006523; organism=Gossypium arboreum; type=contig; length=751bp
AGAGCTGCATATAGAAGCTGGTTCCATGTATCAGGCAAACCAGGAAGACA
CCAATGGCTACAATCATTACCCGAATGGTCACCACTATAAGTCGAAGGAT
GAGCATCTTTTCTCAACTGTGACAACGTCGTAATATCGAGCAAGTAAACC
GGTTTGTTCATCGACCCCAATACTTTGTTCACAATGGCAGCAGCTGGTGG
AGCCCCTGCTTGGTATGTGGTACCGGATAGTGGCTCTTGTTCTCCATAAC
AACTCTTTTTTGGTTGGTTCCACTCCCTACCCTCGTAGTGGGTAGGGGAA
ATTCCCTGGAAGAAGACCTTGGTCTTGGTTTGATCGACATTGGTGTCGAC
CCAATTAGCCCATGTTGCAAGCCCTTTGTTGTAGGCCTCTAAACGGTTCA
TATCTTTGTATAATGCAGACCCATCTCTAATGTAATCCCATCCTTGGGAT
TTTCCTTTGTGGGTCCACCAATGCCAACTGTTGAAAATCAAGAGGTCCAT
CCCTATCCATGCATTGCCACCTTTGATGGAGCCTAGATTAAGCACATCAC
CAACATTTTCTTTAACTATATCCACTAAATATGGTGTTCGATACAAATAG
AGTGTTACCCCATAATCCTCAAAGATAACAAAAGACAAAGGGGACTTCCT
CACAAATGTGGTCTTGGAGTTGGGCACAGAAGCATGAATCATACAAGCCA
TAGATTCCCACATGTTCAAACTCAGTGAGTCACCTACAAACATTATTTTC
T
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR026057TBL_C
IPR029986TBL37/38
IPR029962TBL