g.arboreum_cottongen_reftransV1_0006523, g.arboreum_cottongen_reftransV1_0006523 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: G7IKB9_MEDTR (Trichome birefringence-like protein OS=Medicago truncatula GN=MTR_2g015720 PE=4 SV=1) HSP 1 Score: 418.698 bits (1075), Expect = 1.319e-143 Identity = 195/249 (78.31%), Postives = 216/249 (86.75%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES++CMIHASVPN KT+F+R+ S V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI GNAW GMD+L+FNSWHWWTHKG SQGWDYIRDGS L K+M+RL AYNKGL TWA WVD NVD TKTKVFFQGISPTHY G+EWNQPK SC G+ EPLSG+TY AG PP++ I+N VL SM PVYLLDIT LSQLRKDAHPS+YSGDH+GNDCSHWCLPGLPDTWNQLLYAA Sbjct: 109 KIMFVGDSLSLNMWESLSCMIHASVPNVKTSFLRREAQSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLVFNSWHWWTHKGSSQGWDYIRDGSKLVKNMDRLVAYNKGLTTWAKWVDLNVDPTKTKVFFQGISPTHYMGKEWNQPKNSCSGQLEPLSGSTYPAGLPPSSNILNNVLKSMKSPVYLLDITLLSQLRKDAHPSSYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 357
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: D7KDP8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473111 PE=4 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 2.924e-142 Identity = 189/250 (75.60%), Postives = 224/250 (89.60%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGG-NAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 ++MFVGDSLSLNMWES+ACMIHASVPN+KTTF++++PLS + F++YGVTL+LYRTPY+VDI KE VG VLNLG+I+GG NAW MD+L+FNSWHWWTHKG+SQGWDYIRDGS+L +DMNRL+A+ KGL+TWA WVD NVD TKT+VFFQGISPTHYEGREWN+P+KSC G+ +PL G++Y +G PP+A +V+KVL SM KPV LLDITTLSQLRKDAHPS+Y GD G DCSHWCLPGLPDTWNQLLYAA Sbjct: 129 RVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLSTLTFQEYGVTLHLYRTPYIVDISKEKVGRVLNLGAIEGGANAWKNMDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTTKTRVFFQGISPTHYEGREWNEPRKSCSGQMQPLGGSSYPSGQPPSAGVVSKVLNSMKKPVTLLDITTLSQLRKDAHPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 377
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: B9S988_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1014620 PE=4 SV=1) HSP 1 Score: 415.616 bits (1067), Expect = 2.955e-142 Identity = 194/249 (77.91%), Postives = 219/249 (87.95%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES++CMIHASVPN+KT+ V + L V F++Y VTLY++RTPYLVDIV+E+VG VL L SI+GGNAW GMDLLIFNSWHWWTH G+SQ WDY+R G++LYKDM+RLEA+ +G++TWA WVD NVD KTKVFFQGISPTHYEGREWNQPKKSC GE EPLSG+TY GAPPA A+VNKVL ++ KPVYLLDITTLSQLRKDAHPSTY GD SG DCSHWCLPGLPDTWNQLLYAA Sbjct: 120 KIMFVGDSLSLNMWESLSCMIHASVPNAKTSSVDRDSLHSVTFDEYDVTLYMFRTPYLVDIVRESVGRVLRLDSIEGGNAWKGMDLLIFNSWHWWTHTGRSQPWDYVRAGASLYKDMDRLEAFYRGMSTWAKWVDQNVDPAKTKVFFQGISPTHYEGREWNQPKKSCNGEAEPLSGSTYPGGAPPAVAVVNKVLSTIKKPVYLLDITTLSQLRKDAHPSTY-GDGSGTDCSHWCLPGLPDTWNQLLYAA 367
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V4W906_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015687mg PE=4 SV=1) HSP 1 Score: 415.616 bits (1067), Expect = 3.243e-142 Identity = 193/249 (77.51%), Postives = 217/249 (87.15%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD NVD +KTKVFFQGISPTHY+G+EWN KK+C GE EPLSG+TY G PPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG+HSG DCSHWCLPGLPDTWNQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWEDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSKTKVFFQGISPTHYKGKEWNSRKKNCLGELEPLSGSTYPGGVPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGEHSGTDCSHWCLPGLPDTWNQLLYAA 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0D2Q634_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G088800 PE=4 SV=1) HSP 1 Score: 415.616 bits (1067), Expect = 4.011e-142 Identity = 205/264 (77.65%), Postives = 219/264 (82.95%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWD---------------YIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES+ACM+ ASVPNSKTT+VRK PLSFVIFEDYGVTLY+YRTPYLVDIV+E VG VLNLGSI GGNAW GMDLLIFN+WHWWTHKG+SQ +D I LY+DM+RL A+NKGL TWANWVD NVD TKVFFQGISPTHYEGREWNQP K+C GE EPLSG TY AGAPPA A+VNKVLG+M KPVYLLDITTLSQLRKDAHPSTY G SGNDCSHWCLPGLPDTWN LLYAA Sbjct: 115 KIMFVGDSLSLNMWESLACMVQASVPNSKTTYVRKDPLSFVIFEDYGVTLYMYRTPYLVDIVRETVGAVLNLGSINGGNAWKGMDLLIFNTWHWWTHKGQSQAYDSYHLIFHLIIMIMIVKICFYVELYEDMDRLVAFNKGLTTWANWVDNNVDPNITKVFFQGISPTHYEGREWNQPNKNCNGELEPLSGPTYPAGAPPAVAVVNKVLGTMKKPVYLLDITTLSQLRKDAHPSTYGG-LSGNDCSHWCLPGLPDTWNHLLYAA 377
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V7C6G6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G058400g PE=4 SV=1) HSP 1 Score: 414.461 bits (1064), Expect = 9.315e-142 Identity = 190/249 (76.31%), Postives = 215/249 (86.35%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CM+HASVPN+ TTFVR+ LS V F++Y VT+ LYRTPYLVDIV+E VG VL L SI+ GNAWIG+D+LIFNSWHWWTH G SQGWDYIRDGS+L KDM+RLEA+NKG++TW WVD N+D TKTKVFFQGISPTHY+G+EWN+P+KSC GE EPL G+TY AG PPAA IVN VL M VYLLDIT LSQLRKDAHPS YSGDH+GNDCSHWCLPGLPDTWNQLL AA Sbjct: 113 RIMFVGDSLSLNMWESLSCMLHASVPNATTTFVRREALSTVTFQEYEVTIELYRTPYLVDIVREEVGRVLTLDSIQAGNAWIGLDMLIFNSWHWWTHTGNSQGWDYIRDGSSLLKDMDRLEAFNKGMSTWGEWVDENIDPTKTKVFFQGISPTHYQGQEWNEPRKSCSGELEPLGGSTYPAGLPPAANIVNTVLKKMKNKVYLLDITLLSQLRKDAHPSAYSGDHAGNDCSHWCLPGLPDTWNQLLNAA 361
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A059C813_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02713 PE=4 SV=1) HSP 1 Score: 414.461 bits (1064), Expect = 1.158e-141 Identity = 190/249 (76.31%), Postives = 216/249 (86.75%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES++CMIHASVP +KT+F RK LS V F DYGV+++LYRTPYLVDIV+EN+G VL L SI+ G +W GMD+LIFNSWHWWTH GKSQ WDYI+DG + KDM+RL AY KGL+TWA WVD NVD +KTKVFFQGISPTHY+G++W+ PKK+C GEQ PLSG+TY GAPPA ++V+KVL SM PVYLLDITTLSQLRKDAHPSTYSGDHSG DCSHWCLPGLPDTWNQLLYAA Sbjct: 122 KIMFVGDSLSLNMWESLSCMIHASVPGAKTSFARKESLSAVTFPDYGVSIFLYRTPYLVDIVRENIGRVLKLDSIEAGKSWQGMDVLIFNSWHWWTHTGKSQPWDYIQDGGRVVKDMDRLSAYYKGLSTWAKWVDLNVDSSKTKVFFQGISPTHYQGKDWHSPKKNCMGEQSPLSGSTYPTGAPPATSVVSKVLNSMKTPVYLLDITTLSQLRKDAHPSTYSGDHSGTDCSHWCLPGLPDTWNQLLYAA 370
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067GGP0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017263mg PE=4 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 1.295e-141 Identity = 193/249 (77.51%), Postives = 216/249 (86.75%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD NVD ++TKVFFQGISPTHY G+EWN KK+C GE EPLSG+TY GAPPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDTWNQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAA 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B0MHT1_GOSAR (Transmembrane protein OS=Gossypium arboreum GN=F383_12303 PE=4 SV=1) HSP 1 Score: 408.297 bits (1048), Expect = 1.372e-140 Identity = 205/249 (82.33%), Postives = 220/249 (88.35%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES+ACM+ ASVPNSKTT+VR+ PLSF DYGVTLY+YRTPYLVDIV+E VG VLNLGSI GGNAW GMDLLIFN+WHWWTHKG+SQ WDYIRDGS +Y+DM+RL A+NKGL TWANWVD NVD TKVFFQGISPTHYEGREWNQP K+C GE EPLSG TY AGAPPAAA+VNKVLG+M PVYLLDITTLSQLRKDAHPSTY G SGNDCSHWCLPGLPDTWN LLYAA Sbjct: 34 KIMFVGDSLSLNMWESLACMVQASVPNSKTTYVRRDPLSF----DYGVTLYMYRTPYLVDIVRETVGAVLNLGSINGGNAWKGMDLLIFNTWHWWTHKGQSQAWDYIRDGSEVYEDMDRLVAFNKGLTTWANWVDNNVDPNITKVFFQGISPTHYEGREWNQPNKNCNGELEPLSGPTYPAGAPPAAAVVNKVLGTMKNPVYLLDITTLSQLRKDAHPSTYGG-LSGNDCSHWCLPGLPDTWNHLLYAA 277
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V4KRM9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007896mg PE=4 SV=1) HSP 1 Score: 411.764 bits (1057), Expect = 2.201e-140 Identity = 187/250 (74.80%), Postives = 220/250 (88.00%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGG-NAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 ++MFVGDSLSLNMWES+ CMIHASVPN+KTTF++++PLS + F++YGVTLYLYRTPY+VDI KE VG VLNLG+I GG N W MD+L+FNSWHWWTHKG+SQGWDYIRDGS+L +DMNRL+A+ KGL TWA WVD NVD ++TKVFFQGISPTHYEGREWN+P+KSC G+ +PLSG+ Y +G PP+A +V+KVL +M KPV+LLDITTLSQLRKDAHPS Y GD G DCSHWCLPGLPDTWNQLLYAA Sbjct: 135 RVMFVGDSLSLNMWESLGCMIHASVPNAKTTFLKRTPLSTLTFQEYGVTLYLYRTPYIVDISKEKVGRVLNLGAIDGGANLWKNMDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLTTWARWVDQNVDTSRTKVFFQGISPTHYEGREWNEPRKSCNGQAQPLSGSNYPSGQPPSAGVVSKVLNAMRKPVFLLDITTLSQLRKDAHPSIYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 383
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL8_ARATH (Protein trichome birefringence-like 8 OS=Arabidopsis thaliana GN=TBL8 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.211e-46 Identity = 97/273 (35.53%), Postives = 142/273 (52.01%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-VRKSPLS------FVIFEDYGVTLYLYRTPYLVDI----------VKENVG-DVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSM---NKPVYLLDITTLSQLRKDAHPSTY----SGDHSGNDCSHWCLPGLPDTWNQLLYA 749 +I+FVGDS+ N WES+ CM+ +V N + V +P+S + F + +T+ +RTP+LV + VK V D N S K W+G D+L+FN+ HWW Y ++G L K M +E + K L TW +WV +D ++ VFF+ SP HY WN C + EP + P +++ + M + V L+IT L++ RKDAHPS Y + + + DCSHWCLPG+PDTWN++LYA Sbjct: 150 RIVFVGDSIGRNQWESLLCMLSQAVSNKSEIYEVNGNPISKHKGFLSMRFPEQNLTVEYHRTPFLVVVGRPPENSPVDVKMTVRVDEFNWQSKK----WVGSDVLVFNTGHWWNEDKTFIAGCYFQEGGKLNKTMGVMEGFEKSLKTWKSWVLERLDSERSHVFFRSFSPVHYRNGTWNL-GGLCDADTEPETDMKKMEPDPIHNNYISQAIQEMRYEHSKVKFLNITYLTEFRKDAHPSRYREPGTPEDAPQDCSHWCLPGVPDTWNEILYA 417
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL3_ARATH (Protein trichome birefringence-like 3 OS=Arabidopsis thaliana GN=TBL3 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.778e-46 Identity = 87/272 (31.99%), Postives = 142/272 (52.21%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVD------IVKENVGDVLNLGSIKG-GNAWIGMDLLIFNSWHWWTHKGKSQG-WDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKS-CYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY--------SGDHSGN-----DCSHWCLPGLPDTWNQLLYA 749 +++FVGDSL + WES C++ + +P + + R ++Y T+ Y PY+V+ ++ + ++ + S+K W G D+L+FN++ WW + + W +G + + ++ AY GL TWANWVD+ VD KT+VFF +SPTH +W +P + C+ E +P+ + +V+ V+ M V +++IT LS+ R DAH S Y + + + DC HWCLPGLPDTWN++L A Sbjct: 161 RLLFVGDSLQRSQWESFVCLVESIIPEGEKSMKRSQKYFVFKAKEYNATIEFYWAPYIVESNTDIPVISDPKKRIVKVDSVKDRAKFWEGADILVFNTYVWWMSGLRMKALWGSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPNGTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVYTETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLA 432
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL33_ARATH (Protein trichome birefringence-like 33 OS=Arabidopsis thaliana GN=TBL33 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.729e-44 Identity = 95/275 (34.55%), Postives = 142/275 (51.64%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVD------IVKENVGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLE-----AYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW-NQPKKSCYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGD------------HSGNDCSHWCLPGLPDTWNQLLYA 749 ++M+VGDSL+ M+ SM C++H +P + + L+ ++Y T+ Y P+L++ IV V+ GSI K G W G+D++IFN++ WW K I GS K+ N +E AY G+ + WV N+D+ KT+VFF +SPTH +G +W +P ++CY + + +Y ++ +V G P+ LL+IT +S RKDAH S Y S DC HWCLPGL DTWN+LL+A Sbjct: 150 RMMYVGDSLNRGMFVSMICLLHRLIPEDQKSIKTNGSLTVFTAKEYNATIEFYWAPFLLESNSDDAIVHRISDRVVRKGSINKHGRHWKGVDIIIFNTYLWWMTGLKMN----ILQGSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGEPGQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSIYKKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFA 420
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL10_ARATH (Protein trichome birefringence-like 10 OS=Arabidopsis thaliana GN=TBL10 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 3.553e-44 Identity = 94/274 (34.31%), Postives = 146/274 (53.28%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-VRKSPLS----FVIF--EDYGVTLYLYRTPYLVDIVKENVGD------VLNLGSIK-GGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAP-PAAAIVNKVLG-----SMNKPVYLLDITTLSQLRKDAHPSTYS-GDHS-----GNDCSHWCLPGLPDTWNQLLYA 749 +++FVGDS+ N WES+ C++ ++V N + + SP++ F++F E+Y T+ YR+P+LV + +G L L ++ + W D+L+ N+ HWW ++ Y ++G + MN +AY + L T W+ T +D KT+VFF+ +P H+ G +W + +C+ E P GT+ + I+ VL S V LL+IT ++ RKD HPS Y G H DCSHWCLPG+PDTWN+L YA Sbjct: 171 RLVFVGDSIGRNQWESLLCLLSSAVKNESLIYEINGSPITKHKGFLVFKFEEYNCTVEYYRSPFLVPQSRPPIGSPGKVKTSLKLDTMDWTSSKWRDADVLVLNTGHWWNEGKTTRTGCYFQEGEEVKLKMNVDDAYKRALNTVVKWIHTELDSNKTQVFFRTFAPVHFRGGDW-KTGGTCHMETLPEIGTSLASSETWEQLKILRDVLSHNSNRSETVKVKLLNITAMAAQRKDGHPSLYYLGPHGPAPLHRQDCSHWCLPGVPDTWNELFYA 443
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL32_ARATH (Protein trichome birefringence-like 32 OS=Arabidopsis thaliana GN=TBL32 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.088e-43 Identity = 95/274 (34.67%), Postives = 143/274 (52.19%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKEN-----VGD-VLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWD-YIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW-NQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGS-----MNKPVYLLDITTLSQLRKDAHPSTY------------SGDHSGNDCSHWCLPGLPDTWNQLLYA 749 K+MFVGDSL+ M+ S+ C++H+ +P + + L+ +DY T+ Y P+L++ +N V D ++ GSI K G W G D+++FN++ WW K + + +D +M +AY L T WV N+D KT+VFF +SPTHY+G +W + K+CY + P+ + + + KV+G PV +L+IT LS RKDAH S Y + S +DC HWCLPGL DTWN+L +A Sbjct: 175 KMMFVGDSLNRGMYVSLICLLHSQIPENSKSMDTFGSLTVFSLKDYNATIEFYWAPFLLESNSDNATVHRVSDRIVRKGSINKHGRHWRGADIVVFNTYLWWRTGFKMKILEGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGEQGKNCYNQTTPIQDMNHWPSD--CSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTSIYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFA 446 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006523 ID=g.arboreum_cottongen_reftransV1_0006523; Name=g.arboreum_cottongen_reftransV1_0006523; organism=Gossypium arboreum; type=contig; length=751bpback to top |