Contributor | Institution | Country | Data (font green link to data) | Year |
---|---|---|---|---|
Frelichowski, James E. Jr. | USDA-ARS College Station, TX | USA | US NCGC Germplasm Evaluation 2006-2024 data | 2024 |
Grover, Corrinne E; Arick, Tony | Iowa State U, Mississippi State U | USA | Three Kokia genome assemblies and annotations | 2024 |
Lin, Zhong-Xu | Huazhong Agri. U. | China | Gossypium barbadense M210936 CDS and protein data | 2024 |
Guo, Wang-Zhen | Nanjing Agri. U. | China | The NAU SSR 1-8704 series data | 2024 |
Yuan, Dao-Jun; Meng,Qing-Ying | Huazhong Agri. U. | China | Genome assemblies and annotations of 12 Gossypium barbadense | 2024 |
Liu, Fang | CRI-CAAS | China | Kindly provide images of wild species for CottonGen use | 2024 |
Xu, Yu-Hui; Li, Xue-Yuan | Xinjiang Academy of Agri. Sci. | China | Gossypium hirsutum 'Yuan Main 11' genome assembly and annotations | 2024 |
Udall, Joshua A. | USDA-ARS College Station, TX | USA | Gossypium hirsutum 'PSC355' genome assembly and annotation data | 2023 |
Xu, Yan-Chao; Liu, Fang | CRI-CAAS | China | Ggos(D6), Ghar(D2-2), Gtri(D8), and Gklo(D3-k) genome and annotations | 2023 |
Xu, Yan-Chao; Liu, Fang | CRI-CAAS | China | G.ekmanianum, G.stephensii, G.hirsutum genome and annotations | 2023 |
Zhao, Tianlun; Zhu, Shui-Jin | Zhejiang University | China | Gossypium bickii (G1) genome JZU_v1.0 | 2022 |
Xu, Zhenzhen; Shen, Xin-Lian | Jiangsu Academy of Agri. Sci. | China | Gossypium anomalum genome assembly v1.2 and annotations a1.1 | 2022 |
Billings G; Hulse-Kemp A; Campbell T | NCSU; USDA-ARS Florence, SC | USA | ARS_PD_SNP63K_genotyping_2021 | 2022 |
Udall, Joshua A. | USDA-ARS College Station, TX | USA | Gossypium herbaceum (A1) 'Wagad' genome and annotation | 2022 |
Udall, Joshua A. | USDA-ARS College Station, TX | USA | Gossypium hirsutum B713 and Bar32 assembly and annotation | 2022 |
He, Shoupu; Du, Xiongming | CRI-CAAS | China | 3278 Genomes re-seq & map to ref. genome (He et al. 2021) | 2021 |
Grover, Corrinne E | Iowa State U | USA | Gossypium stocksii (E1) genome assembly and annotation | 2021 |
Grover, Corrinne E; Udall, Joshua A. | Iowa State U; USDA-ARS, CS, TX | USA | Gossypium anomalum (B1) genome and annotations | 2021 |
Yang, Zhao-En; Li, Fu-Guang | CRI-CAAS | China | G. thurberi and G. davidsonii genomes and annotations | 2021 |
Ma, Zhi-Ying | Hebei Agricultural University | China | NDM8 (Gh) and Pima90 (Gb) genomes and annotations | 2021 |
Xu, Zhenzhen; Shen, Xin-Lian | Jiangsu Academy of Agri. Sci. | China | JAAS 14332 G. raimondii transposable element (TE) sequences | 2021 |
Udall, Joshua A. | USDA-ARS, College Station, TX | USA | Gossypium stocksii genome assembly and annotations | 2021 |
Shen, Xin-Lian | Jiangsu Academy of Agri. Sci. | China | Gossypium anomalum genome assembly and annotations | 2021 |
Zhang, Hong-Bin | Teaxs A&M U. | USA | 474 cotton fiber length (GFL) genes | 2021 |
Bourland, Freddie M. | University of Arkansas, Keiser, AR | USA | Perspectives from 50 Years of Cotton Breeding (2020 CSES) | 2020 |
David M. Goodstein; Jeremy Schmutz | US DOE Joint Genome Institute | USA | G. hirsutum v2.1 (Phytozome id: 527) assembly and annotation | 2020 |
Huang, Gai; Zhu, Yuxian; Yu, John | Wuhan U. & USDA-ARS, CS, TX | China & USA | WHU-USDA A1-076, A2-SXY1 and AD1-TM1 genomes | 2020 |
Grover, Corrinne E. | Iowa State University, Ames, IA | USA | G. thurberi (D1) genome annotation data | 2020 |
Grover, Corrinne E. | Iowa State University, Ames, IA | USA | G. longicalyx (F1) genome assembly and annotation data | 2020 |
Love, Janna | USDA-ARS, College Station, TX | USA | NCGC germplasm - image charactorizations 2014-2017 | 2019 |
Liu, Fang | CRI-CAAS | China | CRI assembly of G2 genome | 2019 |
Udall, Joshua A. | USDA-ARS, College Station, TX | USA | NSF new assembly of D5 genome | 2019 |
Du, Xiong-Ming | CRI-CAAS | China | Updated assembly of 'SXY1' A2 genome | 2019 |
Yuan, Daojun; Wang, Maojun | Huazhong Agri. U. | China | New assembly of HAU-AD1.v1.1 | 2019 |
Tianzhen, Zhang | Zhejiang University | China | New assembly of TM-1 v2.1 and new Hai-7124 v1.1 | 2019 |
Liu,Quanyi, Li,Fuguang; Song,Guoli | CRI-CAAS | China | Published articles from Journal of Cotton Research | 2018 |
Udall, Joshua A. | USDA-ARS, College Station, TX | USA | New genome sequences of Gossypioides kirkii and G. turneri | 2018 |
Yuan, Daojun; Zhang, Xian-Long | Huazhong Agri. U. | China | New genome sequences HAU-AD1.v1 and HAU-AD2.v2 | 2018 |
Frelichowski, James E. Jr. | USDA-ARS, College Station, TX | USA | NCGC - character. scores 2015-2018 from TX and/or Costa Rica | 2018 |
Udall, Joshua A. | Brigham Young U. | USA | VCF data on AD1-JGI genome | 2018 |
McCarty, Jack C. Jr. | USDA-ARS, Mississippi State, MS | USA | 2018 | |
Guo, Wang-Zhen | Nanjing Agri. U. | China | NAU Cotton80KSNP Array data | 2017 |
Stipanovic, Robert D. | USDA-ARS, College Station, TX | USA | G. barbadense seed weight and total gossypol data | 2017 |
Hulse-Kemp, Amanda | U. of California, Davis, CA | USA | SNP63K chips genotypic data (~400 germplasm) | 2016 |
Hulse-Kemp, Amanda; Stelly, David | Texas A&M U. | USA | SNP63K chips genotypic data (inter and intra maps) | 2016 |
Yuan, Daojun; Zhang, Xian-Long | Huazhong Agri. U. | China | Syntenic block data | 2016 |
Hulse-Kemp, Amanda; Stelly, David | Texas A&M U. | USA | SNP63K inter-species Map - TM-1 x 3-79, F2 | 2016 |
Hulse-Kemp, Amanda; Stelly, David | Texas A&M U. | USA | SNP63K intra-species Map - Phytogen 72 x Stoneville 474, F2 | 2016 |
Yuan, Daojun; Zhang, Xian-Long | Huazhong Agri. U. | China | 3-79 genome barbadense sequence - HAU-SGI | 2016 |
Hinze, Lori | USDA-ARS, College Station, TX | USA | NCGC - SSR genotyping data and seed traits scores | 2016 |
Percy, Richard | USDA-ARS, College Station, TX | USA | Allotetraploid cotton mutant genes & morphological markers | 2015 |
Cho, Seungho | Monsanto | USA | SNP linked to genetic male sterility - MON_GH | 2015 |
Frelichowski, James E. Jr. | USDA-ARS, College Station, TX | USA | NCGC - charact. scores - ARS_CGRU_CS, Set -I | 2015 |
Li, Fuguang; Lu, Cairui | CRI-CAAS | China | TM-1 genome hirsutum sequence - CGP-BGI v1.0 | 2015 |
Zhang, Tian-Zhen | Nanjing Agri. U. | China | TM-1 genome hirsutum sequence - NAU-NBI v1.1 | 2015 |
Carla Young; Pepper, Alan | Texas A&M U. | USA | SNP GBS data - TAMU | 2015 |
Hulse-Kemp, Amanda; Stelly, David | Texas A&M U. | USA | SNP63K chips 70,000 (45, 667 "HulseKemp" - TAMU) | 2014 |
Frelichowski, James E. Jr. | USDA-ARS, College Station, TX | USA | NCGC Std. descriptors and rating scale - GRIN COT | 2014 |
Fang, David D. | USDA-ARS, New Orleans, LA | USA | SNP sequences 5,839 - USDA_CFB | 2014 |
Cho, Seungho | Monsanto | USA | SNP marker primers 96 and genetic map positions - MON_ | 2014 |
Ashrafi, Hamid | U. of California, Davis, CA | USA | TM-1 hybrid assembly data GMAPed to BGI-D5 and BGI-A2 | 2014 |
Lacape, Jean Marc | CIRAD | France | SNP sequences 35,719 - CIR | 2014 |
Udall, Joshua A. | Brigham Young U. | USA | WGS data [BAM format] of 7 sp. mapped to JGI-D5 genome | 2014 |
Li, Fuguang; Lu, Cairui | CRI-CAAS | China | A2-genome arboreum sequence - BGI v2.0 | 2014 |
Zhu, Qian-Hao | CSIRO | Australia | Map CSIRO_SNP Genetic | 2014 |
Wilson, Iain | CSIRO | Australia | SNP sequences 37413 SNP & 3090 RAD_SNP - CSIRO | 2014 |
Gore, Michael A. | Cornell U. | USA | SNP 491 sequences and genotyping data - Cornell | 2014 |
Lin, Zhong-Xu | Huazhong Agri. U. | China | SSR primers - 1,129 new HAU | 2014 |
Love, Janna | USDA-ARS, College Station, TX | USA | nearly 10,000 images of 1,270 germplasm | 2013 |
Love, Janna | USDA-ARS, College Station, TX | USA | over 12,000 images of 2075 germplasm | 2013 |
Guo, Wang-Zhen | Nanjing Agri. U. | China | SSR primers - NAU PPS updates - NAU | 2013 |
Udall, Joshua A. | Brigham Young U. | USA | Homeo-SNPs from A, D, and At/Dt genome | 2013 |
Paterson, Andrew H. | PGML U. Georgia | USA | D5-genome raimondii sequence - JGI v2.0 | 2013 |
Fang, David D. | USDA-ARS, New Orleans, LA | USA | Map T3-RIL (2012) v2 | 2013 |
Wang, Kun-Bo | CRI-CAAS | China | SSR primers - CCRI | 2012 |
Guo, Wang-Zhen | Nanjing Agri. U. | China | Map TH-BC1 (2012) | 2012 |
Yu, Shu-Xun | CRI-CAAS | China | D5-genome raimondii sequence - BGI v1.0 | 2012 |
Lacape, Jean Marc | CIRAD | France | Map CIRAD-HDC | 2012 |
Udall, Joshua A. | Brigham Young U. | USA | Unigene Cotton46a Contigs | 2012 |
Yu, John Z. | USDA-ARS, College Station, TX | USA | Map T3-RIL (2012) | 2012 |
Jena, Satya Narayan | NBRI | India | SSR primers and sequences - NBRI | 2012 |
Lin, Zhong-Xu | Huazhong Agri. U. | China | Map E3-BC1 | 2011 |
Kumpatla, Siva Prasad | Dow AgroSciences | USA | SSR primers and sequences - DOW | 2011 |
Gore, Michael A. | USDA-ARS, Maricopa, AZ | USA | Phenotyping TN-RIL | 2011 |
Gore, Michael A. | USDA-ARS, Maricopa, AZ | USA | Genotyping TN-RIL | 2011 |
Zeng, Ling-He | USDA-ARS, Stoneville, MS | USA | Association Map | 2011 |
Lacape, Jean Marc | CIRAD | France | Map GV-RIL | 2010 |
Van Deynze, Allen | U. of California, Davis, CA | USA | SNP primers and sequences -UCcg | 2010 |
Xu, Zhan-You | USDA-ARS, Texas A&M U. | USA | TM-1 FPC contigs (updates) | 2009 |
Yu, Jing | USDA-ARS, Texas A&M U. | USA | Map AD-ref | 2009 |
Cantrell, Roy G.; Xiao, Jinhua | Monsanto | USA | Map Monsanto SSR Bin | 2009 |
Cantrell, Roy G.; Xiao, Jinhua | Monsanto | USA | SSR primers and sequences | 2009 |
CRI-CAAS | CRI-CAAS | China | Reference - CNCTS | 2008 |
Kohel, Russell J. | USDA-ARS, College Station, TX | USA | Images - Cotton Mutation | 2008 |
Kohel, Russell J. | USDA-ARS, College Station, TX | USA | Reference - Cotton Literatures | 2008 |
Du, Xiong-Ming | CRI-CAAS | China | China Cotton Germplasm Collection | 2008 |
Du, Xiong-Ming | CRI-CAAS | China | Germplasm Evaluation - China | 2008 |
Abdurakhmonov, Ibrokhim Y. | Institute of Genetics and PEB | Uzbekistan | Germplasm Evaluation - UZ-PC-GRIN | 2008 |
Abdurakhmonov, Ibrokhim Y. | Institute of Genetics and PEB | Uzbekistan | Germplasm Collection - UZ-PC-GRIN | 2008 |
Pepper, Alan E. | Texas A&M U. | USA | SSR primers and sequences - Gh | 2008 |
Scheffler, Brian E. | USDA-ARS, Starkville, MS | USA | CMD Panel Screens - BNL | 2007 |
Scheffler, Brian E. | USDA-ARS, Starkville, MS | USA | CMD Panel Screens - CIR | 2007 |
Fang, David D. | Delta & Pine Land Company | USA | CMD Panel Screens - DPL | 2007 |
Scheffler, Brian E. | USDA-ARS, Starkville, MS | USA | CMD Panel Screens - JESPR | 2007 |
Scheffler, Jodi A. | USDA-ARS, Starkville, MS | USA | CMD Panel Screens - STV | 2007 |
Frelichowski, James E. Jr. | USDA-ARS, College Station, TX | USA | Germplasm Evaluation - GRIN COT | 2007 |
Frelichowski, James E. Jr. | USDA-ARS, College Station, TX | USA | Germplasm Collection - GRIN COT | 2007 |
Love, Janna | USDA-ARS, College Station, TX | USA | Pedigrees of GRIN COT | 2007 |
Ulloa, Mauricio | USDA-ARS, Shafter, CA | USA | CMD Panel Screens - MUSB | 2007 |
Ulloa, Mauricio | USDA-ARS, Shafter, CA | USA | CMD Panel Screens - MUSSMUCS | 2007 |
Bowman, Daryl T. | North Carolina State U. | USA | Pedigrees of Upland and Pima Cultivars | 2007 |
Zhang, Tian-Zhen | Nanjing Agri. U. | China | Map 7T-RIL | 2007 |
Yu, Ji-Wen | CRI-CAAS | China | Map CH-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map CS-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map D | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map DS-F2 | 2007 |
Lacape, Jean Marc | CIRAD | France | Map GV-BC1 | 2007 |
Lacape, Jean Marc | CIRAD | France | Map GV-BC2 | 2007 |
Zhang, Xian-Long | Huazhong Agri. U. | China | Map HP | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map im-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map n2-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map PE-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map PK-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map SA-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | Map TW-F2 | 2007 |
Paterson, Andrew H. | PGML U. Georgia | USA | RFLP-SSR marker data | 2007 |
Pepper, Alan E. | Texas A&M U. | USA | SSR primers and sequences - CM | 2007 |
Fang, David D. | DPL Company | USA | SSR primers and sequences - DPL | 2007 |
Zhang, Xian-Long | Huazhong Agri. U. | China | SSR primers and sequences - HAU | 2006 |
Ulloa, Mauricio | USDA-ARS, Shafter, CA | USA | SSR primers and sequences - MUCS | 2006 |
Ulloa, Mauricio | USDA-ARS, Shafter, CA | USA | SSR primers and sequences - MUSS | 2006 |
Scheffler, Jodi A. | USDA-ARS, Starkville, MS | USA | SSR primers and sequences - STV | 2006 |
Lacape, Jean Marc | CIRAD | France | Map T3-RIL | 2006 |
Ulloa, Mauricio | USDA-ARS, Shafter, CA | USA | SSR primers and sequences - MUSB | 2005 |
Xu, Zhan-You | USDA-ARS, Texas A&M U. | USA | TM-1 FPC contigs | 2005 |
Du, Xiong-Ming | CRI-CAAS | China | China Germplasm Sample Screens | 2005 |
Lacape, Jean Marc | CIRAD | France | SSR primers and sequences - CIR | 2005 |
Saha, Sukumar | USDA-ARS, Starkville, MS | USA | SSR primers and sequences - MGHES | 2005 |
Zhang, Tian-Zhen | Nanjing Agri. U. | China | SSR primers and sequences - NAU | 2005 |
Yu, John Z. | USDA-ARS, College Station, TX | USA | SSR primers and sequences - TMB | 2005 |
Pepper, Alan E. | Texas A&M U. | USA | SSR primers and sequences - JESPR | 2002 |
Cantrell, Roy G. | Cotton Inc. | USA | SSR primers and sequences - BNL | 2000 |
Percival, Adward E. | USDA-ARS, College Station, TX | USA | Cotton Obsolete Variety Collection | 1997 |
Percival, Adward E. | USDA-ARS, College Station, TX | USA | Asiatic Cotton Collection | 1997 |
Percival, Adward E. | USDA-ARS, College Station, TX | USA | Gossypium barbadense Collection | 1997 |
Percival, Adward E. | USDA-ARS, College Station, TX | USA | Cotton Wild Species Collection | 1997 |
Percival, Adward E. | USDA-ARS, College Station, TX | USA | Cotton Race Collection | 1997 |