Work Completed

2025

• [DATA] 
• [DATA] Gossypium hirsutum (AD1) 'EM22' genome HAU v1.0 data available (3/26/25)
• [DATA] Gossypium hirsutum (AD1) 'ZM113' T2T genome CRI_v1.0 data available (3/26/25)
• [DATA] Gossypium hirsutum (AD1) 'TM-1' genome UTX_v3.1 data available (3/20/25)
• [DATA] Phenotype data of 10 salt-stress traits in the 288 tested cotton accessions added (3/20/25)
• [DATA] New GWAS data of fiber quality and yield traits on hirsutum AD1-NBI genome available (3/12/25) 
• [DATA] Gossypium hirsutum (AD1) 'TM-1' T2T genome JZU_v1.0 data available (3/11/25)
• [DATA] GWAS and QTL of 117 Indian cotton germplasm for six yield-related traits available (2/26/25) 
• [OUTREACH] 2025 January CottonGen Newsletter released (1/30/25)
• [DATA] GWAS data of 2901 fiber quality traits with markers and AD1-CRI genome positions available (1/17/25)
• [OUTREACH] CottonGen Oral presentation at the 2025 Beltwide Cotton Conference, New Orleans, Louisiana (1/16/25)

2024

• [OUTREACH] CottonGen_2024_year_end_flyer released (12/22/24)
• [DATA] NCGC before 2006 germplasm evaluation data updated (12/20/24)
• [OUTREACH] Training Video: How to find orthologs and corresponding functional annotations (11/28/24)
• [DATA] RBTN 2023 fiber traits data added and searchable (11/14/23)
• [DATA] New genome assemblies TM-1_HAU_v2.0 and 3-79_HAU_v3.0 available (11/8/24)
• [OUTREACH] 2024 October CottonGen Newsletter released (10/31/24)
• [DATA] Gossypium raimondii (D5) Telomere-to-Telomere genome PKU_v1.0 data available (10/30/24)
• [OUTREACH] CottonGen Oral presented at the WORLD COTTON RESEARCH CONFERENCE-8 & ICGI-2024, Tashkent, Uzbekistan (10/3-7/24)
• [OUTREACH] Training Video: Search marker by trait & view its genome position (9/27/24)
• [DATA] Added new traits and descriptors, and NCGC Characterized data trait T37-T40 (9/27/24)
• [DATA] NCGC Characterized data trait T23-T36 added (9/20/24)
• [DATA] 155 new NCGC germplasm names added (9/19/24)
• [DATA] NCGC Characterized data trait 13-22 added (9/19/24)
• [DATA] Add more germplasm names from NCGC data (9/19/24) 
• lDATA] NCGC Characterized data trait 1-12 added (9/18/24)
• [OUTREACH] Training Video: Search markers by trait & view the marker's genome position (8/30/24)
• [DATA] Added new germplasm registration publications (8/30/24)
• [DATA] Added 49 new or updated germplasm (8/30/24)
• [DATA] New or updated NCGC traits and descriptors (8/21/24)
• [OUTREACH] 2024 July CottonGen Newsletter released (7/31/24)
• [DATA] 148 QTLs  of agronomic, fiber quality, and abiotic stress tolerance traits added (7/31/24)
• [DATA] 2528 GWAS genome positions on NAU-NBI v1 genome added to JBrowse (7/25/24)
• [DATA] 2489 CottonGen identified QTLs added to NAU-NBI v1 genome (7/25/24)
• [DATA] CottonGen Primer/GWAS/QTL on NAU-NBI genome identified and a GFF3 file created (7/25/24)
• [DATA] CottonGen sequence-based InDel and RFLP marker positions on NAU-NBI genome added (7/22/24)
• [DATA] CottonGen sequence-based SNP marker positions add to AD1-NBI genome (7/19/24)
• [DATA] 77996 NAU-NBI-SSR (NAU origin) marker positions on NAU-NBI genome added to chado (7/16/24)
• [DATA] 3 Gene annotation data from microPublication biology added (7/15/24) 
• [DATA] CottonGen sequence-based SSR marker positions added to AD1-NBI genome (7/15/24)
• [DATA] NAU-NBI-SSR marker positions on Dt chromosomes and scaffolds added to chado (7/10/24)
• [OUTREACH] Training Video: How to use the Ortholog/Paralog search (6/30/24)
• [DATA] Four new genetic maps with 50 QTLs available (6/30/24)
• [DATA] 2386 CottonGen identified QTLs added to AD1-UTX v2.1 genome (6/30/24)
• [DATA] CottonGen QTL on AD1-UTX genome identified and a GFF3 file created (6/20/24) 
• [DATA] CottonGen sequence-based SNP marker positions on AD1-UTX genome added to chado (6/19/24)
• [DATA] CottonGen sequence-based InDel marker positions on AD1-UTX genome added to chado (6/13/24)
• [DATA] CottonGen sequence-based RFLP marker positions on AD1-UTX genome added to chado (6/12/24)
• [DATA] CottonGen sequence-based SSR marker positions on AD1-UTX genome added to chado (6/11/24)
• [DATA] CottonGen primer-based marker positions on AD1-UTX genome added to chado (6/8/24)
• [DATA] CottonGen functional annotations added to K.cookei, K.drynarioides, and K.kauaiensis genomes (6/7/24)
• [DATA] 123 New publications from Journals of Cotton Research and Cotton Sciences added (6/4/24)
• [OUTREACH] Training Video: Search and Download Protein Sequences (5/30/24)
• [SEARCH] Protein sequences are now included in Sequence Searches (5/28/24)
• [DATA] New whole genome assemblies of AD1 cultivars CSX 8308, GA230, and UA48 available (5/15/24)
• [DATA] New whole genome assemblies of Kokia species K.cookei, K.drynarioides, and K.kauaiensis available (5/8/24)
• [OUTREACH] 2024 April CottonGen Newsletter released (4/30/24)
• [DATA] CottonGen functional annotations added to Gossypium barbadense (AD2) 'Gb_M210936' genome HAU_v1 (4/22/24)
• [DATA] CottonGen functional annotations added to XAAS Gossypium hirsutum (AD1) 'Yuanmian11' genome assembly (4/2/24)
• [OUTREACH] Training Video: Downloading markers from a map region (3/31/24)
• [DATA] New ZJU Gossypium hirsutum wild (Gossypium purpurascens Poir.) HPF17 genome assembly and annotation data (3/29/24)
• [DATA] 3641 NAU SSR primers added (3/20/24)
• [DATA] New HAU 12 G. barbadense whole genome assemblies added (3/11/24)
• [DATA] New HAU Gossypium barbadense (AD2) 'Gb_M210936' genome assembly available (3/6/24)
• [OUTREACH] Training Video: How to find a marker associated with a trait. (2/29/24)
• [DATA] New flower images of 17 wild species were added to each of their home pages. (2/22/24)
• [DATA] Pages of Species updated with 3 new species and corrections on genome names within the K genome group - according to Wang 2018 (2/22/24)
• [DATA] Genes from 6 whole genome data added(5) or updated(1) to CottonCyc. (2/16/24)
• [DATA] New XAAS Gossypium hirsutum (AD1) 'Yuanmian11' genome assembly [NCBI assemblyID: GCA_035221635.1] available (2/9/24)
• [OUTREACH] 2024 January CottonGen Newsletter released (1/30/24)
• [OUTREACH] CottonGen Oral and Poster Presented at Plant and Animal Genome Conference 31,   (1/12-18/24)
• [OUTREACH] CottonGen Oral Presented at Cotton Improvement Conference, 2024 Beltwide Cotton Conference (1/3-5/24)

Work Completed in Previous Years:
 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013