g.arboreum_cottongen_reftransV1_0006523, g.arboreum_cottongen_reftransV1_0006523 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: I1JF25_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 2.265e-140 Identity = 190/249 (76.31%), Postives = 214/249 (85.94%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES++CM+HASVPN+ T+FVR+ +S V FEDYGVT+ LYRTPYLVDI +E+VG VL L SIK G+AW GMD+LIFNSWHWWTHKG SQGWDYIRDGS L KDM+RL+A+ KGL TWA WVD N+D KTKV FQGISPTHY+G+EWNQP+KSC GE EPL+G+TY AG PPAA IVNKVL +M VYLLDIT LSQLRKDAHPS Y DH+GNDCSHWCLPGLPDTWN+LLYAA Sbjct: 120 KIMFVGDSLSLNMWESLSCMLHASVPNATTSFVRRQAISTVTFEDYGVTIQLYRTPYLVDIDREDVGRVLTLNSIKAGDAWTGMDMLIFNSWHWWTHKGDSQGWDYIRDGSNLVKDMDRLDAFFKGLTTWAGWVDQNIDLNKTKVLFQGISPTHYQGQEWNQPRKSCSGELEPLAGSTYPAGLPPAANIVNKVLKNMKNQVYLLDITLLSQLRKDAHPSVYGVDHTGNDCSHWCLPGLPDTWNELLYAA 368
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: X2KY70_CITSI (TBL1 OS=Citrus sinensis PE=2 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 3.157e-140 Identity = 191/249 (76.71%), Postives = 214/249 (85.94%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVT LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD +VD +KTKVFFQGISPTHY G+EWN KK+C GE EPLSG+TY GAPPAA++VNKVL +NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDTWNQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTFLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLDVDPSKTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSPINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAA 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067GDZ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017263mg PE=4 SV=1) HSP 1 Score: 410.223 bits (1053), Expect = 5.422e-140 Identity = 192/249 (77.11%), Postives = 215/249 (86.35%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD NVD ++TKVFFQGISPTHY G+EWN KK+C GE EPLSG+TY GAPPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDT NQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTRNQLLYAA 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067GQW8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017263mg PE=4 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.012e-140 Identity = 193/251 (76.89%), Postives = 216/251 (86.06%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQ--GWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD NVD ++TKVFFQGISPTHY G+EWN KK+C GE EPLSG+TY GAPPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDTWNQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAA 365
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B2RKF9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032520 PE=4 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 1.281e-139 Identity = 189/249 (75.90%), Postives = 213/249 (85.54%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES++CM+HASVPN+ T+FVR+ +S V FEDYGV + LYRTPYLVDI +E+VG VL L SIK G+AW GMD+LIFNSWHWWTHKG SQGWDYIRDGS L KDM+RL+A+ KGL TWA WVD N+D KTKV FQGISPTHY+G+EWNQP+KSC GE EPL+G+TY AG PPAA IVNKVL +M VYLLDIT LSQLRKDAHPS Y DH+GNDCSHWCLPGLPDTWN+LLYAA Sbjct: 120 KIMFVGDSLSLNMWESLSCMLHASVPNATTSFVRRQAISTVTFEDYGVIIQLYRTPYLVDIDREDVGRVLTLNSIKAGDAWTGMDMLIFNSWHWWTHKGDSQGWDYIRDGSNLVKDMDRLDAFFKGLTTWAGWVDQNIDLNKTKVLFQGISPTHYQGQEWNQPRKSCSGELEPLAGSTYPAGLPPAANIVNKVLKNMKNQVYLLDITLLSQLRKDAHPSVYGVDHTGNDCSHWCLPGLPDTWNELLYAA 368
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL1_ARATH (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana GN=TBL1 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.908e-60 Identity = 106/271 (39.11%), Postives = 157/271 (57.93%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSF-------VIFEDYGVTLYLYRTPYLV---DIVKEN--VGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY-----SGDHSGN-----DCSHWCLPGLPDTWNQLLYA 749 +++FVGDSL+ NMWES+ C++ SV + F F +F+DY T+ + +P+LV ++ ++N + L L + K + G D+L+FN+ HWWTH+ S+G DY ++GS ++ ++ EA+ K L TW WVD NV+ K+ VFF+G SP+H+ G +WN +C E EP+ TY I+ +VL M PV L+IT L+ RKDAHPS Y S + S + DCSHWCLPG+PD+WN++ YA Sbjct: 264 RLVFVGDSLNRNMWESLVCILKGSVKDESQVFEAHGRHQFRWEAEYSFVFKDYNCTVEFFASPFLVQEWEVTEKNGTKKETLRLDLVGKSSEQYKGADILVFNTGHWWTHEKTSKGEDYYQEGSTVHPKLDVDEAFRKALTTWGRWVDKNVNPKKSLVFFRGYSPSHFSGGQWNA-GGACDDETEPIKNETYLTPYMLKMEILERVLRGMKTPVTYLNITRLTDYRKDAHPSIYRKQKLSAEESKSPLLYQDCSHWCLPGVPDSWNEIFYA 533
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL36_ARATH (Protein trichome birefringence-like 36 OS=Arabidopsis thaliana GN=TBL36 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 7.109e-56 Identity = 98/261 (37.55%), Postives = 147/261 (56.32%), Query Frame = -3 Query: 12 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVK-ENVGDVLNLGSIK-GGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLS--GTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDH-----------SGNDCSHWCLPGLPDTWNQLL 749 +IM VGDS+ N WES+ C++ + +P + P D+ ++ P LV++ + + VL+L SI+ W G+D+L+F+S HWWTH + WDY DG+ ++K M+ + AY +GL TWA WV+ N+D +KTKV F+ +SP RE Q CY ++ PL ++ + P + ++NKVL +M VYL DITT+S R+D HPS + +DCSHWCLPG+PD WN++L Sbjct: 118 RIMLVGDSMMRNQWESLVCLVQSVLPTHRKKLTYNGPTMSFHSLDFETSIEFCWAPLLVELKRGVDRKRVLHLDSIEDNARYWRGVDVLVFDSAHWWTHSQRWSSWDYYMDGNKIFKAMDPMVAYERGLTTWAKWVEINLDPSKTKVIFRTVSP-----RESGQ---MCYNQKHPLPSLSSSTKPHVPQQSRVLNKVLRTMKYRVYLYDITTMSAYRRDGHPSVFKRAMHEEEKHHRIAGPSSDCSHWCLPGVPDIWNEML 370
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL2_ARATH (Protein trichome birefringence-like 2 OS=Arabidopsis thaliana GN=TBL2 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.494e-55 Identity = 102/273 (37.36%), Postives = 150/273 (54.95%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-------VRKSPLSFVIFEDYGVTLYLYRTPYLVDI-----VKENVGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVL-GSMNKPVYLLDITTLSQLRKDAHPSTYSGDH----------SGNDCSHWCLPGLPDTWNQLLYAA 749 K++FVGDS++ NMWES+ C++ S+ + K + +K FEDY T+ +P+ V V + L L + K + + D+LIFN+ HWWTH G +Y ++G+ +Y + LEAY + L TWA WVD N+D+++T + F+G S TH+ G WN + C+ E EP+ T+Y A P + +L +M PV ++I+ L+ RKD HPS Y + S DCSHWCLPG+PDTWNQLLY + Sbjct: 260 KLVFVGDSINRNMWESLICILRHSLKDKKRVYEISGRREFKKKGFYAFRFEDYNCTVDFVGSPFFVRESSFKGVNGTTLETLRLDMMDKTTSMYRDADILIFNTGHWWTHDKTKLGENYYQEGNVVYPRLKVLEAYKRALITWAKWVDKNIDRSQTHIVFRGYSVTHFRGGPWNSGGQ-CHKETEPIFNTSYLAKYPSKMKALEYILRDTMKTPVIYMNISRLTDFRKDGHPSIYRMVYRTEKEKREAVSHQDCSHWCLPGVPDTWNQLLYVS 531
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL6_ARATH (Protein trichome birefringence-like 6 OS=Arabidopsis thaliana GN=TBL6 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 6.280e-54 Identity = 99/266 (37.22%), Postives = 148/266 (55.64%), Query Frame = -3 Query: 9 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF--------VRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVG----DVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY------SGDHSGNDCSHWCLPGLPDTWNQLLY 749 +++FVGDS++ N WESM C++ +V + K + K SF F DY T+ Y T +LV + +G + L + ++ + + W G ++L+FN+ HWW+H G +Y ++G ++ ++ A+ K L TW++WVD NVD KT+VFF+ +P+H+ G EWN C PL+ T++ +IV VL M PV LL+++ LSQ R DAHPS Y + DCSHWCLPG+PDTWN LY Sbjct: 206 RLVFVGDSINRNQWESMLCLLFQAVKDPKRVYETHNRRITKEKGNYSFR-FVDYKCTVEFYVTHFLVREGRARIGKKRRETLRIDAMDRTSSRWKGANILVFNTAHWWSHYKTKSGVNYYQEGDLIHPKLDVSTAFKKALQTWSSWVDKNVDPKKTRVFFRSAAPSHFSGGEWNS-GGHCREANMPLN-QTFKPSYSSKKSIVEDVLKQMRTPVTLLNVSGLSQYRIDAHPSIYGTKPENRRSRAVQDCSHWCLPGVPDTWNHFLY 468
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL4_ARATH (Protein trichome birefringence-like 4 OS=Arabidopsis thaliana GN=TBL4 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.283e-53 Identity = 100/276 (36.23%), Postives = 150/276 (54.35%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNS--------KTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDV-------LNLGSIKGGNAWI--GMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYS--GDHSG--------NDCSHWCLPGLPDTWNQLLYAA 749 +++FVGDSL+ NMWES+ C + +++ + K + + F D+ ++ ++P+LV + V DV L L I+ I D++IFN+ HWWTH+ +G Y ++G+ +Y+ + EAY K + TWA+WVD+N++ TKT+VFF G S +H+ WN + C GE P+ TY P +V V+ M PV+ ++IT ++ R D HPS Y D G DCSHWCLPG+PD+WNQLLYA Sbjct: 168 RVVFVGDSLNRNMWESLVCSLRSTLEDKNRVSKIIGKQSNLPNEGFYGFRFNDFECSIDFIKSPFLVQ--ESEVVDVYGKRRETLRLDMIQRSMTKIYKNADIVIFNTGHWWTHQKTYEGKGYYQEGNRVYERLEVKEAYTKAIHTWADWVDSNINSTKTRVFFVGYSSSHFRKGAWNSGGQ-CDGETRPIQNETYTGVYPWMMKVVESVISEMKTPVFYMNITKMTWYRTDGHPSVYRQPADPRGTSPAAGMYQDCSHWCLPGVPDSWNQLLYAT 440
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL5_ARATH (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana GN=TBL5 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.792e-52 Identity = 97/269 (36.06%), Postives = 143/269 (53.16%), Query Frame = -3 Query: 3 IMFVGDSLSLNMWESMACMIHASVPNSKTTF------VRKSPLSFVI-FEDYGVTLYLYRTPYLVDI-----VKENVGDVLNLGSIKGGNA-WIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSG--------NDCSHWCLPGLPDTWNQLLYAA 746 +M VGDS++ N +ESM C++ + + + + K FV FEDY T+ R+ +LV + N L++ I +A W D+L+FN+ HWW H ++G +Y ++G +Y + EAY + L TWA W+D NV+ K VF++G S H+ G EW+ SC GE EP+ + P IV + + M PV LL++T L+ RKD HPS Y ++ DCSHWCLPG+PD WN L+YA+ Sbjct: 211 LMLVGDSMNRNQFESMLCVLREGLSDKSRMYEVHGHNITKGRGYFVFKFEDYNCTVEFVRSHFLVREGVRANAQGNTNPTLSIDRIDKSHAKWKRADILVFNTGHWWVHGKTARGKNYYKEGDYIYPKFDATEAYRRSLKTWAKWIDQNVNPKKQLVFYRGYSSAHFRGGEWDS-GGSCNGEVEPVKKGSIIDSYPLKMKIVQEAIKEMQVPVILLNVTKLTNFRKDGHPSIYGKTNTDGKKVSTRRQDCSHWCLPGVPDVWNHLIYAS 478
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL29_ARATH (Protein ESKIMO 1 OS=Arabidopsis thaliana GN=ESK1 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.916e-48 Identity = 100/282 (35.46%), Postives = 142/282 (50.35%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSI-----------KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRD-GSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKK-SCYGEQEPL--------SGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAH-------------PSTYSGDHSGNDCSHWCLPGLPDTWNQLLYA 749 ++MFVGDSL+ N WESM C++ + VP + + + LS EDY T+ Y P+LV E+ D N+ SI K G W G+D L+FN++ WW + + D G Y+++ R AY + + TW +WV+ N+D +T VFF +SP H + +W P C E P+ GT Y+ ++ V S+N PVY L+IT LS+ RKDAH P + ++ DC HWCLPGLPDTWN+ LY Sbjct: 209 RMMFVGDSLNRNQWESMVCLVQSVVPPGRKSLNKTGSLSVFRVEDYNATVEFYWAPFLV----ESNSDDPNMHSILNRIIMPESIEKHGVNWKGVDFLVFNTYIWWMNTFAMKVLRGSFDKGDTEYEEIERPVAYRRVMRTWGDWVERNIDPLRTTVFFASMSPLHIKSLDWENPDGIKCALETTPILNMSMPFSVGTDYR-----LFSVAENVTHSLNVPVYFLNITKLSEYRKDAHTSVHTIRQGKMLTPEQQADPNTYADCIHWCLPGLPDTWNEFLYT 481
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL31_ARATH (Protein trichome birefringence-like 31 OS=Arabidopsis thaliana GN=TBL31 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.635e-47 Identity = 92/272 (33.82%), Postives = 141/272 (51.84%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGD------VLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQ-PKKSCYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGN--------------DCSHWCLPGLPDTWNQLLYA 749 ++MF+GDS+ + +ESM CM+ + +P K +F R P+ E+Y ++ Y P++V+ + ++ + ++ L +I K +W G+D+L+F S+ WW H+ K ++ ++ N AY L TWA W T ++ K KVFF +SPTH EWN +CY E P+ +Y IV VL + + V L+IT LS+ RKD H + Y G+ G DC HWCLPG+PDTWN++LYA Sbjct: 136 RLMFIGDSVQRSTFESMVCMVQSVIPEKKKSFHRIPPMKIFKAEEYNASIEYYWAPFIVESISDHATNHTVHKRLVKLDAIEKHSKSWEGVDVLVFESYVWWMHQPKINA---TYGDTSEVREYNVTTAYKMALETWAKWFKTKINSEKQKVFFTSMSPTHLWSWEWNPGSDGTCYDELYPIDKRSYWGTGSNQEIMKIVGDVLSRVGENVTFLNITQLSEYRKDGHTTVY-GERRGKLLTKEQRADPKNYGDCIHWCLPGVPDTWNEILYA 403
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL28_ARATH (Protein trichome birefringence-like 28 OS=Arabidopsis thaliana GN=TBL28 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 6.408e-47 Identity = 98/282 (34.75%), Postives = 142/282 (50.35%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLV-----DIVKENVGD-VLNLGSI-KGGNAWIGMDLLIFNSWHWWTH----KGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKK-SCYGEQEPLSGTTYQAGAPPAAA---------IVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSG-------------NDCSHWCLPGLPDTWNQLLYA 749 ++MFVGDSL+ N WESM C++ + +P + + + L+ +DY T+ Y P+LV D K ++ D ++ SI K G WIG+D L+FNS+ WW + K +D DG Y ++ R AY + L T +WVD N+D T VFF +SP H + +W P+ C E P+ ++ +A + V S+ P++ L+IT LS+ RKDAH S Y+ DC HWCLPGLPDTWN+ LY Sbjct: 140 RLMFVGDSLNRNQWESMVCLVQSVIPPGRKSLNQTGSLTVFKIQDYNATVEFYWAPFLVESNSDDPEKHSIIDRIIMPESIEKHGVNWIGVDFLVFNSYIWWMNTVSIKVLRGSFD---DGDTEYDEIKRPIAYERVLRTLGDWVDHNIDPLSTTVFFMSMSPLHIKSSDWANPEGIRCALETTPILNMSFNVAYGQFSAVGTDYRLFPVAENVTQSLKVPIHFLNITALSEYRKDAHTSVYTIKQGKLLTREQQNDPANFADCIHWCLPGLPDTWNEFLYT 418
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL35_ARATH (Protein trichome birefringence-like 35 OS=Arabidopsis thaliana GN=TBL35 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.960e-46 Identity = 92/269 (34.20%), Postives = 138/269 (51.30%), Query Frame = -3 Query: 9 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLV-----DIVKENVGD-VLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQ-PKKSCYGEQEPLSGTTYQAGAP--PAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY------------SGDHSGNDCSHWCLPGLPDTWNQLLY 749 ++MFVGDSL+ W SM C++ + +P K + + L+ EDY T+ P LV D V + + ++ S+ K + W D+LIFN++ WW W GS +++ E + +W +WV NVD K +VFF +SPTH REWN + +CYGE++P+ +Y P +V +VL + V +++IT LS+ RKD HPS Y S +DC+HWC+PG+PD WNQLL+ Sbjct: 180 RLMFVGDSLNRGQWISMVCLLQSVIPRDKQSMSPNAHLTIFRAEDYNATVEFLWAPLLVESNSDDPVNHRLSERIIRPDSVLKHASKWQHADILIFNTYLWWRQDSVKLRWSSEEKGSC--EEVKSAEGMEMAMDSWGDWVANNVDPNKKRVFFVTMSPTHQWSREWNPGSEGNCYGEKKPIEEESYWGSGSDIPTMRMVKRVLERLGPKVSVINITQLSEYRKDGHPSVYRKFWEPLNEDRLKNPASYSDCTHWCVPGVPDVWNQLLF 446 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006523 ID=g.arboreum_cottongen_reftransV1_0006523; Name=g.arboreum_cottongen_reftransV1_0006523; organism=Gossypium arboreum; type=contig; length=751bpback to top |