g.barbadense_cottongen_reftransV1_0096982, g.barbadense_cottongen_reftransV1_0096982 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: Y4990_ARATH (Uncharacterized protein At4g19900 OS=Arabidopsis thaliana GN=At4g19900 PE=2 SV=1) HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0 Identity = 381/651 (58.53%), Postives = 473/651 (72.66%), Query Frame = 2 Query: 158 YGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNK-------KDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYD-GGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080 +GAQ CAV+SA+LLL SVS+LY+RLSL S SH H S + D V +L DV TT E E +D EDD + E E + ++K SS FYFDH++G IRRAFNKRSI +WDYD GF + S D +A FGSDD+PLDE +R K+ EV S+EDALL+K +G+KV+PLR+ WGDWFDKK DFLRRDRMFKSN+E LNPLNNP+LQDPD +G TGLTRGDK+VQKW L++ K+ PF KKPL + KK N +LS + T N+ +I + E KN +E+ + + E + H+YADG +WGYYPG++ LSF+DF+D+FF+K KC MRVF++WNSP WM+SVRHQRGLESLL+QHRDACV+VFSET+ELDFF++SF+KD YKVAVAMPNLDELL+DTPTHVFAS+WF WRKTKFY HYSELVRLAALYKYGG+YLDSD+IVL L +L N++G+EDQ G SLNGA+M+F K+SPF++ECLNE+YLTYDD LR NGADLL+RVAKRF NGKN + Q ELN++PS+VFFPI+SQ I YF P E E+ QQD F +IL ES+TFHFWNS+TS+LIPEP+SLVA+ ++H CI CS++L Sbjct: 11 HGAQACAVMSAVLLLASVSLLYTRLSLFS-SHSPNHLRSGSSEDTVLFPDSVLVSDSDVETTGGGGRGSTTSTEDRIDEHDDAIEDDGVSNEEDENQDAEQEQEVDLNRNKAASSSGFYFDHVNGVIRRAFNKRSIDEWDYDYTGFSIDSDSSGDKSSRAAFGSDDVPLDESIRRKIVEVTSVEDALLLK--SGKKVSPLRQGWGDWFDKKGDFLRRDRMFKSNIETLNPLNNPMLQDPDSVGNTGLTRGDKVVQKWRLNQIKRNPFMAKKPLSVVS----------EKKEPNEFRLLSSVGEIKRGER--KTLDNDEKIEREEQKN--VESERKHDEVTEHMYADGTKWGYYPGIEPSLSFSDFMDSFFRKEKCSMRVFMVWNSPGWMFSVRHQRGLESLLSQHRDACVVVFSETVELDFFRNSFVKDSYKVAVAMPNLDELLQDTPTHVFASVWFDWRKTKFYPTHYSELVRLAALYKYGGVYLDSDVIVLGSLSSLRNTIGMEDQVAGESLNGAVMSFEKKSPFLLECLNEYYLTYDDKCLRCNGADLLTRVAKRFLNGKNRRMNQQELNIRPSSVFFPINSQQITNYFAYPAIEDERSQQDESFKKILNESLTFHFWNSVTSSLIPEPESLVAKFLDHSCIRCSDVL 644
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_MOUSE (Lactosylceramide 4-alpha-galactosyltransferase OS=Mus musculus GN=A4galt PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.254e-19 Identity = 69/211 (32.70%), Postives = 111/211 (52.61%), Query Frame = 2 Query: 1448 NLDELLKDTPTHV-FASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYF--VSPTTESEKLQQDALFNRILTESVTFHFWN--SLTSALIPEPKSLVARLINHPC 2059 +L EL +DTP ++ +W + + S+ R+A L+K+GGIYLD+D IVLK LL L N++G++ + LNGA +AF ++ F+ CL++F Y+ G LL+RV K++ + +++ V P F+PI Q+ +YF +SP E+L Q +L + H WN S + L K+L+A+L C Sbjct: 151 DLQELFEDTPLAAWYSEARHRWEPYQLPVL--SDASRIALLWKFGGIYLDTDFIVLKNLLNLTNTLGIQSR-YVLNGAFLAFERKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFKKWCSIQSLEKSHACRGVTALPPEAFYPIPWQNWKKYFEDISP----EELTQ------LLNATYAVHVWNKKSQGTHLEATSKALLAQLHARYC 348
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_RAT (Lactosylceramide 4-alpha-galactosyltransferase OS=Rattus norvegicus GN=A4galt PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.983e-16 Identity = 68/213 (31.92%), Postives = 108/213 (50.70%), Query Frame = 2 Query: 1448 NLDELLKDTPTHVFASLWF---KWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYF--VSPTTESEKLQQDALFNRILTESVTFHFWN--SLTSALIPEPKSLVARLINHPC 2059 +L EL +DTP + W+ + R + S+ R+A L+K+GGIYLD+D IVLK L L N +G++ + LNGA +AF ++ F+ C+ +F Y+ G LL+RV K++ + ++ + V P F+PI Q+ +YF VSP E+L Q +L + H WN S + L ++L+A+L C Sbjct: 152 DLQELFEDTPL----AAWYLEAQHRWEPYLLPVLSDASRIALLWKFGGIYLDTDFIVLKNLRNLTNMLGIQSR-YVLNGAFLAFERKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFKKWCSIHSLKESRACRGVTALPPEAFYPIPWQNWKKYFEDVSP----EELAQ------LLNATYAVHVWNKKSQGTHLEATSRALLAQLHARYC 349
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_PONPY (Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Pongo pygmaeus GN=A4GALT PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.646e-16 Identity = 61/209 (29.19%), Postives = 103/209 (49.28%), Query Frame = 2 Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN--SLTSALIPEPKSLVARLINHPC 2059 +L EL +DTP + ++ +W + S+ R+A ++K+GGIYLD+D IVLK L L N +G + + LNGA +AF++ F+ C+ +F Y+ G LL+RV K++ + ++++ + V P F+PI Q +YF + E R+L + H WN S + ++L+A+L C Sbjct: 10 DLRELFRDTPLADWYTAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFQRRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDISPEE--------LPRLLNATYAVHVWNKKSQGTRFEATSRALLAQLHARYC 207
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_HUMAN (Lactosylceramide 4-alpha-galactosyltransferase OS=Homo sapiens GN=A4GALT PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.900e-16 Identity = 58/185 (31.35%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN 1993 +L EL +DTP +A++ +W + S+ R+A ++K+GGIYLD+D IVLK L L N +G + + LNGA +AF + F+ C+ +F Y+ G LL+RV K++ + ++++ + V P F+PI Q +YF E + + L R+L+ + H WN Sbjct: 145 DLRELFRDTPLADWYAAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYF-------EDINPEEL-PRLLSATYAVHVWN 318
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_PANTR (Lactosylceramide 4-alpha-galactosyltransferase OS=Pan troglodytes GN=A4GALT PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.508e-16 Identity = 58/185 (31.35%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN 1993 +L EL +DTP +A++ +W + S+ R+A ++K+GGIYLD+D IVLK L L N +G + + LNGA +AF + F+ C+ +F Y+ G LL+RV K++ + ++++ + V P F+PI Q +YF E + + L R+L+ + H WN Sbjct: 145 DLRELFQDTPLADWYAAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRSCRGVTTLPPEAFYPIPWQDWKKYF-------EDINPEEL-PRLLSATYAVHVWN 318
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GAT_GORGO (Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Gorilla gorilla gorilla GN=A4GALT PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.638e-15 Identity = 57/185 (30.81%), Postives = 95/185 (51.35%), Query Frame = 2 Query: 1448 NLDELLKDTP-THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVK--PSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWN 1993 +L EL +DTP +A++ +W + S+ R+A ++K+GGIYLD+D IVLK L L N +G + + LNGA +AF + F+ C+ +F Y+ G LL+RV K++ + ++++ + V P F+PI Q +YF E + + L R+ + + H WN Sbjct: 119 DLRELFRDTPLADWYAAVQGRWEPYLLPVL--SDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSR-YVLNGAFLAFERXHEFMALCMXDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYF-------EDINPEEL-PRLFSATYAVHVWN 292
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Match: A4GCT_HUMAN (Alpha-1,4-N-acetylglucosaminyltransferase OS=Homo sapiens GN=A4GNT PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 6.987e-9 Identity = 74/308 (24.03%), Postives = 114/308 (37.01%), Query Frame = 2 Query: 1304 SVRHQRGLESLLAQHRDACVLVFSETIELDFFKDS---------------FLKDGYKVAVAMP----------------------NLDELLKDTP-----THVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGK-----------NISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTS---ALIPEPKSLVARLINHPC 2059 S + +GLE+LL+ R L SE +E F G + MP ++ LL+DTP + AS W S+ RLA ++KYGGIY+D+D+I ++P+ N + + S NG + F PF+ EC+ F Y+ G +L++R+ + + + NIS P+ F+PIS + RY+ E + FN S H WN + A+I +LV L C Sbjct: 35 SFKSHQGLEALLSHRRGIVFLETSERMEPPHLVSCSVESAAKIYPEWPVVFFMKGLTDSTPMPSNSTYPAFSFLSAIDNVFLFPLDMKRLLEDTPLFSWYNQINASAERNWLHIS------SDASRLAIIWKYGGIYMDTDVISIRPIPE-ENFLAAQASRYSSNG-IFGFLPHHPFLWECMENFVEHYNSAIWGNQGPELMTRMLRVWCKLEDFQEVSDLRCLNISFLHPQR-------FYPISYREWRRYY-------EVWDTEPSFN----VSYALHLWNHMNQEGRAVIRGSNTLVENLYRKHC 316
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: K7N0U6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0 Identity = 360/688 (52.33%), Postives = 449/688 (65.26%), Query Frame = 2 Query: 134 LRSRRRPRYGAQVCAVISALLLLFSVSILYSRLSLSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPD-GIGATGLTRGDKMVQKWILSEFKKVPFTG---KKPLGISETGLK-----------------------------VNKGSESKKNENARNV----LXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDS-RLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSEL 2077 LRSRRR YGA +CAVISA+LLLFSVS+LYSRLS S +PH + V H S S D++ + D+ +TL+ + +N H +FD LS S+RR+F+ R D + F + FS D + K F SDD+P+D VRS V +I+DALL+K +PLRE W DWFDKKS FLR+DRMF+SN ++LNPLNNPLLQDPD G TGLTRGD++VQKW + EFKKVPF G K PL ++ L VN GS ++ ++V S + ++S +N ES I K + D+ H+YADG WGYYPGL RLSF+DF+D FF+ GKC RVF++WNSPPWMY+VRHQRGLESLL H DACV+VFSET+ELDFFKDSF+KDGYKVAVAMPNLDELLKD P H+FAS+WF+W+KT FY+ HYSEL+RLAALYKYGGIYLDSDIIVLKP+ LNNSVG+E GS+LNGA+M+F + S F+ ECL EFY+TYDDT LR NGADLL+RVA+++ +N S+K EL V+PS +FFP+SSQ+I RYF++PTTE+EK QQD L IL S+TFHFWNS+T +LIPEP SLV++L+N+ CI CSEL Sbjct: 2 LRSRRRSPYGAYLCAVISAVLLLFSVSLLYSRLSRS-----HPHSHHLPRPSLVSH-----STSADISIASSDDPIDELDFIDETLDPPSLR--------------LNPPPY-----HLFFDPLSASLRRSFHHRHS---DNNNNFPFQSFSDNDDRSKTAFASDDVPVDFTVRSMAARVATIDDALLLK------TSPLREGWSDWFDKKSVFLRKDRMFRSNFDVLNPLNNPLLQDPDAGAATTGLTRGDRIVQKWWIHEFKKVPFPGIKKKAPLNVNVNTLTKVGIERRTLNHNHNNNDDDNNNNEIIKEVVNSGSNGGESSIQKDVDVIGADRGVSVKNHVVNSGSNGGESSIEK----DVDVVGAARGVSVKNHVYADGDTWGYYPGLPRLRLSFSDFMDEFFRLGKCVTRVFMVWNSPPWMYTVRHQRGLESLLFHHPDACVVVFSETVELDFFKDSFVKDGYKVAVAMPNLDELLKDMPAHIFASVWFEWKKTNFYSTHYSELIRLAALYKYGGIYLDSDIIVLKPISFLNNSVGMEGHGAGSALNGAVMSFPRHSLFVKECLEEFYMTYDDTSLRGNGADLLTRVARKYLGDENKSVKHLELKVEPSYIFFPVSSQNITRYFIAPTTETEKAQQDVLLENILHNSLTFHFWNSVTFSLIPEPDSLVSKLLNYACIRCSEL 647
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: K4B7L1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g068790.2 PE=4 SV=1) HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0 Identity = 359/696 (51.58%), Postives = 478/696 (68.68%), Query Frame = 2 Query: 122 MIRNLRSRRRPRYGAQVCAVISALLLLFSVSILYSRLS-LSSKSHMYPHHSSVDNNDAVFHSIPLLSDSEDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNKKDKIFSSGHFYFDHLSGSIRRAFNKRSIQDWDYDGGF-----LNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISE--------TGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNR----------NESRI---------------RKIEVKNGDLETYKTNT--EFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLED--QGSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080 M+RNLR+RRRP YGA +CA+ +A+LLL SVS+LYSRL+ ++ +PH D + + PL+ D D A + D++D D+ ND +N E + +N+ ++ S+ +FY D G +RRAFNKRSI++W+ F L GF ++ KA FGSDD+P+D ++R K++E+ES+EDALL+K +PLRE WG+WF+KKSDFLRRDRMFKSNLE LNP NNP+LQDPDG G TGLT+GDK+V K +++EFKKVPF KKPL +SE L++ K + KN+ + + S + + NR +++RI K +++NG+++ + ++ E SG ++ADGKRWGY+PGL RLSFT+F+D+FF+K KC MRVF++WNSP WM++ R+QRGLES+L +HRDACV+VFSETIEL+FF F+KDG+KVAV MPNLDELL TPTHVFAS W++W++T+ Y HYSELVRLAALYKYGGIYLDSDIIVL L +L+N+V ED +G +LNGA+MAFRK SPF+MECL EFY +YDDT+LRWNGADLL+RVA FS N+S ++ E+ +PS VFFPI +I RYF +P E+EK +QD LF IL E+VTFHFWN LTSA++PE SL RLIN+ C+ CS+ L Sbjct: 1 MLRNLRTRRRPLYGAHICALAAAILLLLSVSLLYSRLNFFLQPNNPHPHPLQY---DTISLNNPLVDDLAD-ADYRSSDDRIDELDVADSNNNNDDEFLLSNESEEDDEEIINQYPRVSST-YFY-DQRHGVVRRAFNKRSIEEWEDYVNFESRMKLGLGFKSDES--KAAFGSDDLPVDVQMRMKLSEIESVEDALLLKG------SPLREGWGEWFEKKSDFLRRDRMFKSNLEALNPNNNPMLQDPDGAGTTGLTKGDKIVLKGLMNEFKKVPFLVKKPLSVSELTKSELVNDALELQKMAGLAKNDVFESKELKFNSDLVKTNDEDVNRGKRVKRRTLNDDARIGKRVVHDSGGDSAPRSKEDIRNGNMKVVEDDSRGEVSGLVFADGKRWGYFPGLHPRLSFTNFMDSFFRKAKCTMRVFMVWNSPAWMFTARYQRGLESVLNRHRDACVVVFSETIELNFFS-GFVKDGFKVAVVMPNLDELLLGTPTHVFASFWYEWKQTRHYPFHYSELVRLAALYKYGGIYLDSDIIVLNSLSSLSNTVAFEDDRRGKTLNGAVMAFRKHSPFVMECLKEFYASYDDTQLRWNGADLLTRVASNFSVNGNLSSRKREIKFQPSFVFFPIGHNNITRYFSAPAMETEKTKQDTLFKTILKEAVTFHFWNGLTSAMVPEAGSLAHRLINYNCLRCSDTL 681
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: V7CI33_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G098100g PE=4 SV=1) HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0 Identity = 320/542 (59.04%), Postives = 391/542 (72.14%), Query Frame = 2 Query: 479 SGHFYFDHLSGSIRRAF-NKRSIQDWDYDGGFLNEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKK--PLGISETGLKVNK-GSESKKNENARNVLXXXXXXXXXXXXXNT--NRNESRIRKIEVKNGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQGS--SLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080 S +YFD L+ SIRR+F + S++ D D KA F SDD+P+D+ R+ +T V ++EDALL+K +PLR+ WG+WFDKKS FLR+DRMF+SN E+LNPLNNPLLQDPD +GATGLTRGD+MVQKW + EFKKVPF G K PL I+ V K G+E + + + N+ N ES I+ G K N HIYADG WGYYPGL RL F F+DAFF+ GKC RVFI+WNSPPWMY+VRHQRGLESLL H ACV+VFSE +ELDFFKDSF+KDGYKVAVAMPNLDELLKDTP H+FAS+WF+W+KT+FY+ HYSEL+RLAALYKYGGIYLDSDIIVLKP+ LNN VG+ED+G+ +LNGA+MAF+K S FI ECL EFY+TYDDT LR NGADLL+RVA+++ +N S+ +L V+PS +FFP+SS +I RYF++PTTE++K QQD L IL +S+TFHFWNSLT +LIPEP SLV+RL NH CI C ELL Sbjct: 82 SPDYYFDPLTASIRRSFLSPPSLRQSHTDNNLPLRSVPDHDPS-KAAFASDDVPVDDATRTMVTRVATMEDALLLKN------SPLRDGWGEWFDKKSVFLRKDRMFRSNFEVLNPLNNPLLQDPDAVGATGLTRGDRMVQKWWIHEFKKVPFPGTKKVPLNINVLPTPVTKVGAERRTLNHNTINNNNNNEHEIIQEVMNSGINGGESSIQNDANVIGARSQSKKN-----HIYADGDTWGYYPGLPLRLPFNTFMDAFFRVGKCVTRVFIVWNSPPWMYTVRHQRGLESLLFHHPAACVVVFSEMVELDFFKDSFVKDGYKVAVAMPNLDELLKDTPAHIFASVWFEWKKTEFYSTHYSELIRLAALYKYGGIYLDSDIIVLKPISLLNNCVGMEDRGAGRALNGAVMAFQKHSLFIKECLEEFYMTYDDTSLRGNGADLLTRVARKYLAEENKSVNNLKLKVEPSYIFFPVSSLNISRYFIAPTTETDKAQQDVLLENILHKSLTFHFWNSLTFSLIPEPDSLVSRLFNHACIRCLELL 611
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: A0A022RT26_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002953mg PE=4 SV=1) HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0 Identity = 312/546 (57.14%), Postives = 391/546 (71.61%), Query Frame = 2 Query: 479 SGHFYFDHLSGSIRRAFNKRSIQDWDYDGGFL-----NEGFSGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGI--SETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVK---NGDLETYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080 S +++FD + G IRR+FN+RSI++W+ F + GF +D + FGSDD+ +DE++R K++EV+ IEDALL+K LRE WG+WFDKK DFLRRDRMFKSN+EILNPLNNP+LQDPDG G TGLTRGDK+ QK ++ EFK+ PF KKPL I SETG+ KG NE +R++E K N + + + + YADGKRWGYYPGL+ RLSF +F+DAFF++G C MRVF++WNSP W + VR QRGLESLL H DACV+VFSETIEL+FF F+KDGYKVA MP+LDELL+DTPTH+FAS+W W+KT+ Y IHYSELVRLAALYKYGGIYLDSDI+VLKPL LNN+VG ED G +LNGALMAFRK SPFIM CL EFY +YDD++LRWNGADLL+RVA + + ++ SI EL+++P++VFFPI I+RY +P TE +K +QD +FN+I ESVT HFWNSLTSA+IPEP+SLV R +N CI CS++L Sbjct: 116 SSNYFFDPVKGVIRRSFNRRSIEEWEDYVPFSWKLTSDLGFKNDDTE--PVFGSDDVLVDEKLRKKLSEVKKIEDALLLKGSV------LREGWGEWFDKKGDFLRRDRMFKSNIEILNPLNNPILQDPDGTGVTGLTRGDKIFQKGLMDEFKRTPFLIKKPLAISESETGIVGEKG------------------------------NEKEVRRVERKTLDNNQINKVRGSKALAKEYYADGKRWGYYPGLNGRLSFGNFMDAFFRRGMCKMRVFMVWNSPVWAFGVRQQRGLESLLYHHADACVVVFSETIELNFFT-GFVKDGYKVAAVMPDLDELLRDTPTHIFASVWHDWKKTRHYPIHYSELVRLAALYKYGGIYLDSDILVLKPLSELNNTVGYEDDSAGKTLNGALMAFRKHSPFIMSCLEEFYASYDDSKLRWNGADLLTRVANKVLSKEDNSITTTELSLQPASVFFPIGHNTILRYLTAPGTEIDKAEQDVVFNKISNESVTVHFWNSLTSAMIPEPESLVFRFLNRYCIRCSDVL 622
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Match: Q2MGS1_MEDTR (Alpha 1,4-glycosyltransferase family protein OS=Medicago truncatula GN=MTR_4g084060 PE=4 SV=1) HSP 1 Score: 588.186 bits (1515), Expect = 0.000e+0 Identity = 311/538 (57.81%), Postives = 378/538 (70.26%), Query Frame = 2 Query: 488 FYFDHLSGSIRRAFNKRSIQDWDYDGGFLNEGF---SGEDVKIKATFGSDDIPLDEEVRSKMTEVESIEDALLVKKVAGRKVNPLREKWGDWFDKKSDFLRRDRMFKSXXXXXXXXXXXXXQDPDGIGATGLTRGDKMVQKWILSEFKKVPFTGKKPLGISETGLKVNKGSESKKNENARNVLXXXXXXXXXXXXXNTNRNESRIRKIEVKNGDLE--TYKTNTEFSGHIYADGKRWGYYPGLDSRLSFTDFVDAFFKKGKCDMRVFIIWNSPPWMYSVRHQRGLESLLAQHRDACVLVFSETIELDFFKDSFLKDGYKVAVAMPNLDELLKDTPTHVFASLWFKWRKTKFYTIHYSELVRLAALYKYGGIYLDSDIIVLKPLLTLNNSVGLEDQ--GSSLNGALMAFRKESPFIMECLNEFYLTYDDTRLRWNGADLLSRVAKRFSNGKNISIKQPELNVKPSAVFFPISSQHIIRYFVSPTTESEKLQQDALFNRILTESVTFHFWNSLTSALIPEPKSLVARLINHPCIHCSELL 2080 ++FD ++ SIRR+F I + + F S K F SDDIPLD+EVR K T + SIEDALL+K + LRE WG+WFDKKS FLR+D+M KS+ E NP+ NPLLQDPD +G + LTRGDK++QKW ++EFKKV F+ K NTN N + + V G E T K N HIYADG WGY+P L RLSF DF+DAFF+KGKC MRVF++WNSPPWM++VR+QRGLESLL H +ACV+VFSETIELDFFKDSF+KDGYK+AV MPNLD+LL+ TP ++F+++WF+WRKTKFY+ HYSEL+RLAALYKYGGIYLDSDIIVLKP+ LNNSVG+EDQ GSSLNGALMAF + S FI ECL EFY+TYDD LRWNGADLL+RVA++F +N +IKQ ELN +PS VF+PI+S I RYFV+PTTE +K QQD L +IL ES+TFHFWNSLTSAL+PEP SLVA+L+N+ CI C ELL Sbjct: 92 YFFDPITSSIRRSFKTPPI----FTSSITTDDFTILSPPQDPSKFAFTSDDIPLDDEVRRKATVITSIEDALLLKSPS------LREIWGEWFDKKSVFLRKDKMLKSSFEAFNPMLNPLLQDPDSVGVSSLTRGDKVLQKWWINEFKKVSFSVHK----------------------------------------NTNNNGNLV---TVAKGGTERRTLKLNDNGDNHIYADGNNWGYFPELPLRLSFNDFMDAFFRKGKCVMRVFMVWNSPPWMFTVRYQRGLESLLFHHPNACVVVFSETIELDFFKDSFVKDGYKIAVVMPNLDQLLEGTPANIFSTVWFEWRKTKFYSTHYSELIRLAALYKYGGIYLDSDIIVLKPISFLNNSVGMEDQAAGSSLNGALMAFGRHSLFIKECLEEFYMTYDDNSLRWNGADLLTRVAQKFVGEENKTIKQLELNKEPSHVFYPINSHDITRYFVAPTTEMDKAQQDVLLEKILHESLTFHFWNSLTSALVPEPDSLVAKLMNYACIRCLELL 576 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 8
BLAST of g.barbadense_cottongen_reftransV1_0096982 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0096982 ID=g.barbadense_cottongen_reftransV1_0096982; Name=g.barbadense_cottongen_reftransV1_0096982; organism=Gossypium barbadense; type=contig; length=2404bpback to top |