|
Alignments (GFF3 | EXCEL | TXT) |
Sequences (FASTA) |
|
BGI Assembly v2.0 |
|
Pseudomolecules |
Pseudomolecule sequences |
|
BGI Annotation v1.0 |
|
Predicted transcripts aligned to genome |
Predicted genes coding sequences (CDS) |
|
|
Predicted genes protein sequences |
|
Marker |
|
CottonGen RFLP markers mapped to genome |
CottonGen RFLP marker sequences (3,451) |
|
CottonGen SNP markers mapped to genome |
CottonGen SNP & InDel marker sequences (183,035) |
|
CottonGen InDel markers mapped to genome |
|
|
|
|
|
Protein |
|
Arabidopsis thaliana TAIR10 proteins |
Arabidopsis thaliana TAIR10 protein sequences |
|
Cacao theobroma v1.1 proteins |
Cacao theobroma v1.1 protein sequences |
|
|
|
|
Glycine max v1.1 proteins |
Glycine max v1.1 protein sequences |
|
Vitis vinifera proteins |
Vitis vinifera protein sequences |
|
NCBI Gossypium protein (Aug 2014) |
NCBI Gossypium proteins (Aug 2014) |
|
Uniprot SwissProt &TrEMBL Gossypium protein (Aug 2014) |
Uniprot SwissProt &TrEMBL Gossypium protein (Aug 2014) |
|
Transcripts |
|
NCBI dbEST for all Gossypium |
|
NCBI dbEST for G. arboreum |
|
|
NCBI dbEST for G. barbadense |
|
|
NCBI dbEST for G. herbaceum |
|
|
NCBI dbEST for G. hirsutum |
|
|
NCBI dbEST for G. raimondii |
|
|
UniGenes |
|
|
NCBI mRNA for all Gossypium |
|
|
CottonGen unigene v1.0 |
CottonGen unigene v1.0 sequences (21,698) |
|
J. Udall 2012 Unigene contigs |
J. Udall 2012 Unigene contig sequences (56373) |
|
PlantGDB Gossypium unigenes |
|
|
PlantGDB G. arboreum unigenes |
|
|
PlantGDB G. barbadense unigenes |
|
|
PlantGDB G. hirsutum unigenes |
|
|
PlantGDB G. raimondii unigenes |
|
|
TIGR CGI unigenes |
|
CottonGen G. arboreum protein analysis |
|
|
GO assignments from InterProScan |
|
|
IPR assignments from InterProScan |
|
|
Genes in KEGG Pathways |
|
|
Genes mapped to KEGG orthologs |
|
|
KEGG hier file |
|
|
KEGG image maps |
|
