AD chromosomes

Chromosome Identification in Tetraploid Cotton

Reference: Wang K, Song X, Han Z, Guo W, Yu J, Sun J, Pan J, Kohel R, Zhang T. Complete assignment of the chromosomes of Gossypium hirsutum L. by translocation and fluorescence in situ hybridization mapping. Theoretical and applied genetics. 2006; 113(1):73-80.

Last update: 2023-05

Proposed
At-genome
Former AD genome chromosome number Std. Chrom. name in CottonGen   Proposed
Dt-genome
Former AD genome chromosome number Std. Chrom. name in CottonGen
At.01 chr.01 AD_ch01_At.01   Dt.01 chr.15 AD_ch15_Dt.01
At.02 chr.02 AD_ch02_At.02   Dt.02 chr.14 AD_ch14_Dt.02
At.03 chr.03 AD_ch03_At.03   Dt.03 chr.17 AD_ch17_Dt.03
At.04 chr.04 AD_ch04_At.04   Dt.04 chr.22 AD_ch22_Dt.04
At.05 chr.05 AD_ch05_At.05   Dt.05 LGD08/Chr. 19 AD_ch19_Dt.05
At.06 chr.06 AD_ch06_At.06   Dt.06 chr.25 AD_ch25_Dt.06
At.07 chr.07 AD_ch07_At.07   Dt.07 chr.16 AD_ch16_Dt.07
At.08 LGA02/Chr. 8 AD_ch08_At.08   Dt.08 LGD03/Chr. 24 AD_ch24_Dt.08
At.09 chr.09 AD_ch09_At.09   Dt.09 chr.23 AD_ch23_Dt.09
At.10 chr.10 AD_ch10_At.10   Dt.10 chr.20 AD_ch20_Dt.10
At.11 LGA03/Chr.11 AD_ch11_At.11   Dt.11 LGD02/Chr.21 AD_ch21_Dt.11
At.12 chr.12 AD_ch12_At.12   Dt.12 chr.26 AD_ch26_Dt.12
At.13 LGA01/Chr.13 AD_ch13_At.13   Dt.13 chr.18 AD_ch18_Dt.13
CottonGen std. names for unknown chr.'s:   AD_chU_At   or  AD_chU_Dt   or  AD_chU
 

CottonGen std. chr. names for diploids (A, B, C, D, E, F, G, K) use below format:
[genome group name].[(two digits) chr.number or U (for unknown chr. num.)]
For example: A.01, A.02, ... A.U; D.01, D.02, ... D.U