CotAD_15731, CotAD_15731_BGI-AD1_v1.0 (mRNA) Gossypium hirsutum

Transcript Overview
NameCotAD_15731
Unique NameCotAD_15731_BGI-AD1_v1.0
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length285
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt_chr13chromosomeDt_chr13:37155436..37155720 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CotAD_15731_BGI-AD1_v1.0-CDS-Dt_chr13_BGI-AD1_v1.0-1448072452:37155436..37155720CotAD_15731_BGI-AD1_v1.0-CDS-Dt_chr13_BGI-AD1_v1.0-1448072452:37155436..37155720Gossypium hirsutumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CotAD_15731CotAD_15731_BGI-AD1_v1.0-proteinGossypium hirsutumpolypeptide
CotAD_15731_BGI-AD1_v1.0CotAD_15731_BGI-AD1_v1.0Gossypium hirsutumpolypeptide


Homology
The following BLAST results are available for this feature:
BLAST of CotAD_15731 vs. ExPASy TrEMBL
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of CotAD_15731 vs. ExPASy Swiss-Prot
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Uniprot Swiss-Prot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of CotAD_15731 vs. Araport11
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of CotAD_15731 vs. NCBI nr
Analysis Date: 2019-06-10 (BLASTp of BGI-CGP AD1 genome protein v1.0 vs NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>CotAD_15731_BGI-AD1_v1.0 ID=CotAD_15731_BGI-AD1_v1.0; Name=CotAD_15731; organism=Gossypium hirsutum; type=mRNA; length=285bp
ATGGCGGATTTTACCTCCCTGAAGTTGCAGTGGAGTATATTGAAGCCAGT
AATTCTACCTCCCCGGTCGGCAGTGGAATCGATTGAAAAAGCAGATCTTG
TCTTCATGTATTGGCGTGAAGTAGATCGAAGAAAGCAGACCTTGTCTTCC
CATACTGGTGGTGAAGTAGATCGAATATACAAGTCTTATCTCCCTGAAGT
TGCAGTGGATCAGACTGAAGTAACCAATCCAATCTCCTTGAAGTTGCAAC
GGAGTGGATTAAAACCGCAGATCTCATCTCTCTGA
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protein sequence of CotAD_15731_BGI-AD1_v1.0

>CotAD_15731_BGI-AD1_v1.0 ID=CotAD_15731_BGI-AD1_v1.0; Name=CotAD_15731_BGI-AD1_v1.0; organism=Gossypium hirsutum; type=polypeptide; length=94bp
MADFTSLKLQWSILKPVILPPRSAVESIEKADLVFMYWREVDRRKQTLSS
HTGGEVDRIYKSYLPEVAVDQTEVTNPISLKLQRSGLKPQISSL
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mRNA from alignment at Dt_chr13:37155436..37155720-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CotAD_15731_BGI-AD1_v1.0 ID=CotAD_15731_BGI-AD1_v1.0; Name=CotAD_15731; organism=Gossypium hirsutum; type=mRNA; length=285bp; location=Sequence derived from: Dt_chr13:37155436..37155720- (Gossypium hirsutum
ATGGCGGATTTTACCTCCCTGAAGTTGCAGTGGAGTATATTGAAGCCAGT
AATTCTACCTCCCCGGTCGGCAGTGGAATCGATTGAAAAAGCAGATCTTG
TCTTCATGTATTGGCGTGAAGTAGATCGAAGAAAGCAGACCTTGTCTTCC
CATACTGGTGGTGAAGTAGATCGAATATACAAGTCTTATCTCCCTGAAGT
TGCAGTGGATCAGACTGAAGTAACCAATCCAATCTCCTTGAAGTTGCAAC
GGAGTGGATTAAAACCGCAGATCTCATCTCTCTGA
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Coding sequence (CDS) from alignment at Dt_chr13:37155436..37155720-

>CotAD_15731_BGI-AD1_v1.0 ID=CotAD_15731_BGI-AD1_v1.0; Name=CotAD_15731; organism=Gossypium hirsutum; type=CDS; length=285bp; location=Sequence derived from: Dt_chr13:37155436..37155720- (Gossypium hirsutum
ATGGCGGATTTTACCTCCCTGAAGTTGCAGTGGAGTATATTGAAGCCAGT
AATTCTACCTCCCCGGTCGGCAGTGGAATCGATTGAAAAAGCAGATCTTG
TCTTCATGTATTGGCGTGAAGTAGATCGAAGAAAGCAGACCTTGTCTTCC
CATACTGGTGGTGAAGTAGATCGAATATACAAGTCTTATCTCCCTGAAGT
TGCAGTGGATCAGACTGAAGTAACCAATCCAATCTCCTTGAAGTTGCAAC
GGAGTGGATTAAAACCGCAGATCTCATCTCTCTGA
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