EVM_prediction_Ga09G2743, evm.model.Ga09G2743_CRI-A2_v1.0.a1 (mRNA) Gossypium arboreum

Transcript Overview
NameEVM_prediction_Ga09G2743
Unique Nameevm.model.Ga09G2743_CRI-A2_v1.0.a1
TypemRNA
OrganismGossypium arboreum (Tree cotton)
Sequence length1341
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr09_CRI-A2_v1.0.a1chromosomeChr09_CRI-A2_v1.0.a1:84347549..84348961 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
abacL1227Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
abacL2517Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
acrbR2124Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
acrbR2188Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
achnR2411Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
achnR2450Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
achnR2465Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
achnR2545Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
achbR2932Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
acghR1769Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
acghR1830Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
acacL0747Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
acacL0750Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
acrjR1333Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
acbhR2683Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
acbhR2771Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
acbhR2816Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
achjR2362Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
achjR2403Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
achjR2479Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
acgbR1905Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
acgbR1964Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
acbzR2263Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
acbzR2280Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
acbzR2364Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
achzR2239Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
achzR2264Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
achzR2279Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
achzR2362Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
acgkR1454Gossypioides kirkii genome ISU_v3Gossypioides kirkii
acgrbR1596Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
acgrbR1640Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
acgtbR1712Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
acgtbR1765Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
acghzR2003Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
acghzR2070Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
acghtR2179Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
acghtR2204Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
acghtR2221Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
acghtR2297Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
acgauR1450Gossypium australe (G2) genome CRI_v1.1Gossypium australe
acadR1947Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
acadR2012Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
achgsR1949Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
achgsR2018Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
actoR1933Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
actoR1996Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
acgdR2058Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
acgdR2101Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
acgdR2168Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
acfnR1685Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
acdtR1380Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
acdtR1451Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
achwR1777Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
acawR1712Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
actwR2254Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
actwR2277Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
actwR2291Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
actwR2374Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
acuhR1889Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
acuhR1921Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
acuhR1987Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
acdtoR1129Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
acdttR1214Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
acdfiR1247Gossypium aridum (D4) genome ISU_v1Gossypium aridum
acgtiR1775Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
acgtiR1801Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
acgtiR1808Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
acdriR1299Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
acdriR1305Gossypium raimondii (D5) 'D5-8' genome ISU_v1Gossypium raimondii
acdsiR1007Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
acdsiR1015Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
acdqiR1192Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
acgroR1764Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
acgroR1823Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
acgroR1879Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
acgahR1690Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
acgahR1728Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
acgcfR1387Gossypium arboreum (A2) 'SXY1' genome HAU_v2Gossypium arboreum
acgcfR1421Gossypium arboreum (A2) 'SXY1' genome HAU_v2Gossypium arboreum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
EVM_prediction_Ga03G0535Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
Garb_09G029210.1Gossypium arboreum (A2) 'SXY1' genome HAU_v1Gossypium arboreum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EVM_prediction_Ga09G2743evm.TU.Ga09G2743_CRI-A2_v1.0.a1Gossypium arboreumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Ga09G2743.exon1_CRI-A2_v1.0.a1evm.model.Ga09G2743.exon1_CRI-A2_v1.0.a1Gossypium arboreumexon
evm.model.Ga09G2743.exon2_CRI-A2_v1.0.a1evm.model.Ga09G2743.exon2_CRI-A2_v1.0.a1Gossypium arboreumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Ga09G2743_CRI-A2_v1.0.a1cds.evm.model.Ga09G2743_CRI-A2_v1.0.a1Gossypium arboreumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
EVM_prediction_Ga09G2743evm.model.Ga09G2743_CRI-A2_v1.0.a1-proteinGossypium arboreumpolypeptide
evm.model.Ga09G2743_CRI-A2_v1.0.a1evm.model.Ga09G2743_CRI-A2_v1.0.a1Gossypium arboreumpolypeptide


Homology
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|1050648613|ref|XP_017647654.1| (PREDICTED: uncharacterized protein LOC108487813 [Gossypium arboreum])

HSP 1 Score: 372.474 bits (955), Expect = 3.180e-125
Identity = 187/246 (76.02%), Postives = 199/246 (80.89%), Query Frame = 0
Query:  150 MKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCELSNLGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRP 395
            MKDFLIKRGV I D LNVCPWCNRE ERADHVFFNCNFIAGF KRIFNWWDI W  VSNFEEFY L FKAKI+GSCKSLWL +I ASCWSIWLARNE+VF+NKVL+MDTLIFHSKM ALLWVR A +ECR QERLWW C Y+C  S   S GW  PP G +KFNVSG A  G  G GGVMRDEEGIVRALFSGPS ACD ES EL AIIIA+DVF DI  K S SLI+EMG+R V+NW L KS RP
Sbjct:    1 MKDFLIKRGVKIQDILNVCPWCNREQERADHVFFNCNFIAGFSKRIFNWWDIGWKVVSNFEEFYSLCFKAKILGSCKSLWLIAIVASCWSIWLARNEMVFENKVLSMDTLIFHSKMTALLWVRAAVKECRIQERLWWFCLYKCSFSKSASTGWSFPPHGWLKFNVSGVAFVGAFG-GGVMRDEEGIVRALFSGPSDACDAESTELGAIIIALDVFIDIGWKGSGSLIVEMGTRVVYNWNLDKSRRP 245          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|763816442|gb|KJB83294.1| (hypothetical protein B456_013G240100 [Gossypium raimondii])

HSP 1 Score: 269.626 bits (688), Expect = 4.229e-84
Identity = 147/305 (48.20%), Postives = 185/305 (60.66%), Query Frame = 0
Query:  146 DRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYR--CELSNLGSAG--WRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW 446
            DR+P K+FLI+ GV I      C WC RE E  +H+FF C FI  FW++ F WWD++   V  F +FY L    K  G CKSLWL S+ A+CW +WLARNE+VF+ K  T + L+FHSKMRAL+WVR+  EE R QER WW+CPYR  C L   G  G  W  P  G VKFNVSG A E E   GGV+RD +G+ RALFSGP  A D+ +AE+ AIIIA+DV+  +  K   SLIIE+GS +                    +I+ R    G ++F   E+ GNEMA ALA  G+ R  +FKA W
Sbjct:   18 DRLPTKEFLIRIGVQICQLERGCSWCKREPENVEHLFFQCKFIEVFWRKFFEWWDVELNPVDGFLDFYSLCNNVKFTGVCKSLWLISVTATCWPVWLARNEMVFERKWSTTNNLLFHSKMRALMWVRSVQEELRVQERSWWICPYRSWCYLKKSGMGGMFWCPPRYGWVKFNVSGVANEDEVECGGVLRDLDGVARALFSGPVGAKDSITAEVGAIIIALDVYLAMGWKGKGSLIIEIGSNE--------------------DIENRMIRVGNVSFLKVEKHGNEMAYALALAGIKRSGMFKAGW 302          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|1028974047|ref|XP_016730477.1| (PREDICTED: probable purine permease 11 [Gossypium hirsutum])

HSP 1 Score: 248.44 bits (633), Expect = 5.008e-73
Identity = 119/150 (79.33%), Postives = 129/150 (86.00%), Query Frame = 0
Query:  297 LGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW 446
            +GS GW   P+G +KFN+SG ALEGESGVGGVMRDEEG  RALFSGPSVACD E AEL AIIIAMDVFNDI  K SCSLI+EMGSR+V NWIL KSSRPWSQ+ +FAE+DRRRACA KLTF+ AE GGNEMADALAS GMSRPCLFKAWW
Sbjct:  380 IGSTGWCFSPIGCLKFNISGVALEGESGVGGVMRDEEGTARALFSGPSVACDAEYAELGAIIIAMDVFNDIGWKGSCSLIVEMGSREVLNWILEKSSRPWSQHPVFAELDRRRACARKLTFTLAEAGGNEMADALASAGMSRPCLFKAWW 529          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|763749210|gb|KJB16649.1| (hypothetical protein B456_002G241900 [Gossypium raimondii])

HSP 1 Score: 215.312 bits (547), Expect = 7.003e-64
Identity = 111/231 (48.05%), Postives = 147/231 (63.64%), Query Frame = 0
Query:  220 KIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCEL----SNLGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW 446
            K++   KS WL SI A+CW +WLARN +VF+ +++TM+ LIF SKMRALLW+R+  +E   QE  WW+CP RC +    S L +  W  PP G +KFNV G A E   G  GV+RD EG+  ALFSG   A DT+ AE+ A+++A+DVF  ++ K + SL IE+GS  VF W   KS RPWS    F  I+R       + FS  E+ GNEMA +LA  G++R  +FKAWW
Sbjct:    2 KMVEIRKSFWLISIPAACWIVWLARNGMVFERRMMTMENLIFQSKMRALLWIRSVYDESMLQENFWWICPNRCRIDSIKSKLTALIWHPPPHGCLKFNVCGIANEYRVGCEGVLRDNEGVAIALFSGSVTANDTDLAEIGAMMVALDVFLAMKWKLNDSLFIELGSLVVFYWCANKSMRPWSLQETFTNIERDIEKVRNIVFSTEEKNGNEMASSLAVVGINREEMFKAWW 232          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|1050567615|ref|XP_017604437.1| (PREDICTED: uncharacterized protein LOC108451233 [Gossypium arboreum])

HSP 1 Score: 209.92 bits (533), Expect = 4.925e-62
Identity = 104/215 (48.37%), Postives = 135/215 (62.79%), Query Frame = 0
Query:  152 DFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRC----ELSNLGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMD 362
            +FL KRGVNI +    C WC RE E A H+FF C F+ GFW +IFNWWD+ W  V  F E++ L +  K+    K LWL SIAA+CW+IW+ARN +VFD + + M  L+F SKMRALLW+R+   E   QE+ WWL P RC      SN   + WR PP G +KFNV G A E ++  GG++RD EGI R +FSG       E AE+ A+  A++
Sbjct:    2 EFLSKRGVNIQNFSIFCSWCEREPESASHMFFKCRFMEGFWDKIFNWWDVVWKRVDGFVEYFSLCYNVKLDERKKRLWLISIAAACWTIWIARNGLVFDGRRVNMANLVFQSKMRALLWIRSNHNEIMLQEKFWWLAPQRCCVVSHKSNAVVSFWRLPPCGWLKFNVCGIAKEDKARGGGILRDMEGIAREIFSGAVGTNVAEEAEIGAVKFALE 216          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|1050604286|ref|XP_017624599.1| (PREDICTED: uncharacterized protein LOC108468219 [Gossypium arboreum])

HSP 1 Score: 208.764 bits (530), Expect = 3.219e-61
Identity = 107/250 (42.80%), Postives = 153/250 (61.20%), Query Frame = 0
Query:  201 IDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCEL----SNLGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW 446
            + W  V  F +F++L    +++G  K LWL +IAA+CW+IW ARN ++FDN+ + M+ L+F +KMRALLW+R+  +E   +E +WW+ P RC L    SN      RSPP+G +KF V+G   + ++G GG++RD EG  RALFSG  V    E AE+  + IA+DVF  +  K   SL IE+GS   F W + K+ RP S    FAEI+      G + FS  +  GN +A +LA  G++R  +FKAWW
Sbjct:    1 MGWKQVEGFSDFFVLCNNVQMVGFRKRLWLIAIAAACWTIWFARNGLIFDNRRVCMENLMFLTKMRALLWIRSIHDEIMLKEDIWWISPLRCRLESAKSNFAVFCRRSPPVGKLKFIVNGVEFKEKAGYGGILRDMEGSARALFSGAVVTNIAEEAEIGVVKIALDVFVAVNWKPKESLFIEVGSVVAFAWCVNKALRPLSLLPFFAEIESAILKVGNVVFSLVDRIGNVLASSLAMAGVNRQQMFKAWW 250          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|1334280731|gb|PNS96609.1| (hypothetical protein POPTR_017G126900v3 [Populus trichocarpa])

HSP 1 Score: 175.252 bits (443), Expect = 5.297e-47
Identity = 112/365 (30.68%), Postives = 171/365 (46.85%), Query Frame = 0
Query:   93 ILWDHEKDGEFSVKQLSKLLSEGEGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVR--------TATEECRFQERLWWLCPYRCELSNLGSAG--WRSPPLGGVKFNVSGAALE--GESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            ++W     G F VK L  LL+       VF F  IW+  VPP+V  F W+  I+++  +  L+KRG+ +  S   CP C  E E  DH+F +C      W +I NW  + W    N    +  +         K  W+    +  WSIWL RN+++F  K+   DTL F    R  LW++        ++++  R  E L      R   S     G  W  P     K+NV G+++E  G SG+GGV+R+  GI+  +FS      D+  AEL A+I A+++           +IIE  S  V +W+    +RPW  + +F+   R  +C   +T++++    N MAD LA   + R   F AW
Sbjct:    4 LVWKANNTGRFLVKSLYGLLNPSPPLNTVFFFRGIWRGLVPPKVEVFCWMTIINKINTRSMLVKRGI-LDTSAANCPICLVEEEMVDHLFIHCYKHWLIWSKIINWCGLAWCCPRNLPNLFSQWDSLVYGKFQKKAWVMLFFSVAWSIWLLRNDVIFKQKIPNYDTLFFLIVTRLCLWLKATEPDFPYSSSDLLRSAEGL-----IRWTNSQTLRTGVMWSPPMTNRFKWNVDGSSIEKPGPSGIGGVLRNHHGILLGIFSLSVGILDSNVAELRAVIKAIELSASNCFLHHKHIIIESDSANVISWMNNLHNRPWIHHKLFSSAQRLASCFDSITYTYSYRESNHMADHLAKQRVHRISDFVAW 362          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|1028974605|ref|XP_016730751.1| (PREDICTED: uncharacterized protein LOC107941688 [Gossypium hirsutum])

HSP 1 Score: 142.51 bits (358), Expect = 5.984e-37
Identity = 65/137 (47.45%), Postives = 90/137 (65.69%), Query Frame = 0
Query:  153 FLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCP 289
            F+ +RGV   +    CPWC    E A H+FF C FIAGFW+RIF WW++ W  V  F +F+ L    ++ G  K LWL +IAA+CW+IWLARN +  DN+ + M+ L+F +KMRALLW+R+  +E   +E LWW+ P
Sbjct:    3 FMARRGVCFQNVSLSCPWCEGVPECASHLFFQCKFIAGFWRRIFMWWEMGWKQVEGFSDFFALCNNVQMAGFRKRLWLIAIAATCWTIWLARNGLKIDNRRVCMENLMFLTKMRALLWIRSIHDEIMLKEDLWWISP 139          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|332322180|emb|CCA66188.1| (hypothetical protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 150.984 bits (380), Expect = 1.474e-35
Identity = 119/444 (26.80%), Postives = 191/444 (43.02%), Query Frame = 0
Query:   20 WLGDKNF-MDFPRLFRLAKLKYALVFDYSSYYGFS---NINWEDIFVRPLLDREMGILSRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEG--EGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVR--------TATEECRFQERLWW----LCPYRCELSNLGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            WLGD    + FPRLF +     A +    S+ G     N +W  +F RP    E   L  L+     V L P  +DR++W   K G FSVK  SK L+    + +  + ++ ++W+  +PPR+  F W+  + ++  +  L    +   D   VC  CN   E +DH+  +C F +  W      W++ W+   N  E +  ++  K     + +W +  +   W+IW  RN  +F     + + L     +R + W++        +  E  R  + L W      P    +S  G   W  P  G +K+NV  +   G S +GGV+R+ +GI   +FS P  + +  SAE+ AI  AM +           L++E  S     W       PW+       I   R     ++    +   N +ADALA  G+SR   F AW
Sbjct:  943 WLGDSPLKLRFPRLFTIVDNPMAYIASCGSWCGREWVWNFSWSRVF-RPRDAEEWEELQGLL---GSVCLSPSTDDRLIWTPHKSGAFSVKSCSKELTNTALKPQSKIRIWGRLWRGLIPPRIEVFSWVALLGKLNSRQKLATLNIIPPDDA-VCIMCNGAPETSDHLLLHCPFASSIWLWWLGIWNVSWVFPKNLFEAFEQWYCHKKNPFFRKVWCSIFSIIIWTIWKERNARIFRGISCSSNKLQDLVIIRLMWWIKGWGEAFPYSIVEVLRHPQCLSWDYLKAAPAATAVSVDGML-WSPPNDGVMKWNVDASVNAGRSAIGGVLRNSQGIFVCVFSCPIPSIEINSAEIIAIYRAMQICYSFEFLKRAPLVLESDSANAVMWSNENEGGPWNLNFQLNFIRNARKAGLNISIVHKKRSSNAVADALAKQGLSRTDDFLAW 1380          
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Match: gi|731368551|ref|XP_010696208.1| (PREDICTED: uncharacterized protein LOC104908756 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 148.673 bits (374), Expect = 8.566e-35
Identity = 128/448 (28.57%), Postives = 196/448 (43.75%), Query Frame = 0
Query:   20 WLGDKNFMD-FPRLFRLAKLKYALVFDYSSYYGFSNINWEDIFV--RPLLDREMGILSRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEGEGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSC---KSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVR--------TATEECRFQERLWWLCPYRCE-----LSNLGSAGWRSPPLGGVKFNVSGAALEGE---SGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            W+G+    D FPRL RLA    A +     + G     W+ I    RPL  R++    RL + +  VVL    +D ++W   K G FSVK  S  L++G       +   +W+  VP R+  F WL  ++++  K  L + G+   D  N C +CN ELE  +H+  +C F    W    N W + W   S  E     + + +I G     K +W +      WS+W  RN  +F+N   +++ +     +R   W+R        T++E  R    L W+    C+     + N     W  P +  +++NV  A+ + E   + VGGV+RD++G    LFS P    +  SAE+ AI  A+ +     R     LII   S     W+      PW+   +   I   R     L+        N +ADALA  G+SR   F AW
Sbjct:  728 WIGELPLKDLFPRLHRLAINPLATISSLGIWDGHE---WQWILAWRRPLRARDIEERDRLYELLKSVVLDLSCDDYLVWAPNKSGIFSVKSASLELAKGSISTSHDIIKGVWRGLVPYRIEIFCWLALLEKINTKSKLGRLGIIPIDEAN-CVFCNAELETTNHLLLHCRFSWNLWSWWLNLWGLSW---SFPETIKNAFLQWQIYGKGIFFKKIWHSIFFIIIWSLWKERNSRIFNNSASSLEEIQDLILLRLCWWIRAWDDRFPFTSSEVIRNPACLKWVQSDGCKSGTAIVVNPPMVPWSPPMVNQLQWNVD-ASFKPELDRAAVGGVLRDDKGFFICLFSSPIPKLEINSAEIYAIFRALKISFSSDRIKGHHLIIVSDSANAVRWVNQDDGGPWNLNFMLNYIRNARKSWISLSIVHRGRESNGVADALAKQGLSRADEFLAW 1167          
BLAST of EVM_prediction_Ga09G2743 vs. TAIR10
Match: AT3G25270.1 (| Symbols: | Ribonuclease H-like superfamily protein | chr3:9203934-9204965 REVERSE LENGTH=343)

HSP 1 Score: 81.6481 bits (200), Expect = 6.128e-17
Identity = 84/340 (24.71%), Postives = 137/340 (40.29%), Query Frame = 0
Query:  119 GPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCELSNLGSAGWRSPPLGGVKFNVSGA--ALEGESGVGGVMRDEEGIVRALFSGP---SVACDTESAELEAIIIAMD-VFNDIRRK-----DSCSLIIEMGSRKV----FNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFK 443
            G   +  KIWKLK  P++++FLW L    +   D L +R +  H     C  C +E E + H+FF+C +    W R       +        E  M    +  + + +           W +W +RN++VF  K ++    +  ++     W  T T      ++   +   R +   +    W+ PP   +K+N  GA       +  G +MRDE G+   + SG    S   D+  +E +A+IIAM   ++   RK     DS  +   M + K+    FNWI  +  R W +   F E            F +     N+ AD LA   +     FK
Sbjct:   10 GKAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQ---CHRCCQEDETSQHLFFDCFYAQQVW-RASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQ---VHSSRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVY--MGSGQAIGSTTSDSLESEFQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRFNWI--REGRFWQKR--FEEA----------VFKWVPRTNNQPADILAKHHLQPNQSFK 326          
BLAST of EVM_prediction_Ga09G2743 vs. TAIR10
Match: AT3G09510.1 (| Symbols: | Ribonuclease H-like superfamily protein | chr3:2921804-2923258 FORWARD LENGTH=484)

HSP 1 Score: 79.337 bits (194), Expect = 9.012e-16
Identity = 90/413 (21.79%), Postives = 163/413 (39.47%), Query Frame = 0
Query:   57 WEDIFVRPLLDR-EMGILSRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEGEG---------EGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEE--FYMLYFKAKIIGS----CKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCELSNLGSAGWRSPPLGGVKFNV-SGAALEGESGVGG-VMRDEEGIVRALFSGP-SVACDTESAELEAIIIAMDV-----FNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYS-IFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKA 444
            W+D  +   +D+ + G + R+       +   +  D+I+W++   GE++V+    LL+              G + +  +IW L + P++++FLW      +   + L  RG+ I  S   CP C+RE E  +H  F C F    W+   +    + L  ++FEE    +L F      S       +WL       W IW ARN +VF+    +    +  +K     W+       +       +   + E        WR+PP   VK N  +G  ++     GG ++R+  G   +  S   +   +   AE +A++ A+       +  +  +  C  +I + +   F+  L       S ++  FA I           F F    GN++A  LA  G +    +  
Sbjct:   88 WDDSKISQFVDQSDHGFIHRI------YLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPS---CPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWL------IWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIE--------WRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQ----------FGFIRRKGNKLAHVLAKYGCTYSTFYSG 467          
BLAST of EVM_prediction_Ga09G2743 vs. TAIR10
Match: AT4G29090.1 (| Symbols: | Ribonuclease H-like superfamily protein | chr4:14333528-14335255 FORWARD LENGTH=575)

HSP 1 Score: 72.7886 bits (177), Expect = 1.217e-13
Identity = 90/384 (23.44%), Postives = 155/384 (40.36%), Query Frame = 0
Query:   91 DRILWDHEKDGEFSVKQ--------LSKLLSEGEGEGPVF--VFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNF---------EEFYMLYFKAKIIGSCKSLWLTS---IAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLW-VRTATEECRFQERLWWLCPYRCELSNLGSAG-WRSPPLGGVKFNVSGA--ALEGESGVGGVMRDEEGIV-----RALFSGPSVACDTESAELEAI---IIAMDVFND---IRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMS 437
            D   WD+   G+++VK         ++K  S  E   P    ++ KIWK +  P++++FLW    + +P+   L  R ++   +   CP C    E  +H+ F C F    W            A+S+          +  Y+  +    +G+    W  +   +    W +W  RNE+VF  +      ++  ++     W +RT  E C  + ++           N  S G WR PP   VK N            G+G V+R+E+G V     RAL    SV      AELEA+   ++++  F     I   DS  LI  + + +++      S +P        ++ R  +   ++ F F    GN +A+ +A   +S
Sbjct:  211 DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCK---ETVNHLLFKCTFARLTW------------AISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQV-----------NRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVL----EAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIW-----PSLKP-----TIQDLQRLLSQFTEVKFVFIPREGNTLAERVARESLS 554          
BLAST of EVM_prediction_Ga09G2743 vs. TAIR10
Match: AT2G02650.1 (| Symbols: | Ribonuclease H-like superfamily protein | chr2:735411-736546 FORWARD LENGTH=365)

HSP 1 Score: 63.5438 bits (153), Expect = 7.449e-11
Identity = 80/345 (23.19%), Postives = 129/345 (37.39%), Query Frame = 0
Query:  119 GPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSL------WLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRT--ATEECRFQERLWWLCPYRCELSNLGSAGWRSPPLGGVKFNVSGAALEGE--SGVGGVMRDEEGIVRALFSGPSVACDTESAELEAI--IIAMDVF--NDIR----RKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            G   V   IWKL V P++++FLW      +     L  R +   D+  +C  C  E E   H+ FNC +    W+         W   S+FE+      +     +  SL      W+       W +W +RN  +F  K  + D         A  W+     TE          +     + S   S+ W  PP G VK N      +G   +  G  +R+  G +  L     +   T S   EA+  + A+ V   + +R      DS SL+  + + +  + +LG         ++  +I          +  F     N  ADALAS   +R  LF+++
Sbjct:   29 GSTEVKQAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNI---DADPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIM------WRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVH-----VATNPIQTSRRDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHI-VLCGNAKLQSSTCSLHAEALGFLHALQVIWAHGLRYVWFESDSKSLVTLINNGEDHS-LLG---------TLIYDIRHWMLKLPYCSLEFVNRERNSAADALASHVHARDPLFQSY 348          
BLAST of EVM_prediction_Ga09G2743 vs. TAIR10
Match: AT2G04420.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:1535561-1536226 FORWARD LENGTH=221)

HSP 1 Score: 49.6766 bits (117), Expect = 8.094e-7
Identity = 53/223 (23.77%), Postives = 92/223 (41.26%), Query Frame = 0
Query:  238 WSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYR----CELSNLGSAGWRSPPLGGVKFNVSGA--ALEGESGVGGVMRDEEGIVR--ALFSGPSVACDTESAELEAIIIAMDV-----FNDIRRKDSCSLIIEMGSRK-----VFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLF 442
            W +W +RN++VF ++ L+  + +  +K     W          QE +  L  Y     C         W  PP+G +K N  G+      ++  G ++RD++G  +  A   G ++    ES EL+A+++AM       +  +  +     + E+ +RK      FNWI       WS    F E+           FS+     N+ AD LA + + +   F
Sbjct:    2 WRLWRSRNQLVFQHQNLSWQSTLKRAKDDVQEWENA-------QEYIQSLNHYTVREGCNNRESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNALES-ELQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFGAFNWI----REAWSWSKRFEEV----------IFSWTPRTNNQPADMLAKSHLPQDTSF 202          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.013e-13
Identity = 80/303 (26.40%), Postives = 118/303 (38.94%), Query Frame = 0
Query:   74 SRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEGEGEGPVFV--FDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSL-WLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCELSNLGSA----------GWRSPPLGGVKFNVSGAAL--EGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAM 361
            +RL  R   + LV    DR+ W   +DG+FSV+   ++L+  E   P     F+ +WK++VP RV+ FLWL+    V  ++   +R ++   + NVC  C   +E   HV  +C    G W R+            +   F  LY        C+ + W T  A   W  W  R   +F       D + F  +                    W +  YR    N+             GW SP +G VK N  GA+    G +  GGV+RD  G     FS     C    AEL  +   +
Sbjct:  236 TRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLS---ASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSL--FEWLYDNLGDRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKE--------------------WAVEVYRAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGL 513          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A0D2VJG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G240100 PE=4 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 3.552e-84
Identity = 147/305 (48.20%), Postives = 185/305 (60.66%), Query Frame = 0
Query:  146 DRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYR--CELSNLGSAG--WRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW 446
            DR+P K+FLI+ GV I      C WC RE E  +H+FF C FI  FW++ F WWD++   V  F +FY L    K  G CKSLWL S+ A+CW +WLARNE+VF+ K  T + L+FHSKMRAL+WVR+  EE R QER WW+CPYR  C L   G  G  W  P  G VKFNVSG A E E   GGV+RD +G+ RALFSGP  A D+ +AE+ AIIIA+DV+  +  K   SLIIE+GS +                    +I+ R    G ++F   E+ GNEMA ALA  G+ R  +FKA W
Sbjct:   18 DRLPTKEFLIRIGVQICQLERGCSWCKREPENVEHLFFQCKFIEVFWRKFFEWWDVELNPVDGFLDFYSLCNNVKFTGVCKSLWLISVTATCWPVWLARNEMVFERKWSTTNNLLFHSKMRALMWVRSVQEELRVQERSWWICPYRSWCYLKKSGMGGMFWCPPRYGWVKFNVSGVANEDEVECGGVLRDLDGVARALFSGPVGAKDSITAEVGAIIIALDVYLAMGWKGKGSLIIEIGSNE--------------------DIENRMIRVGNVSFLKVEKHGNEMAYALALAGIKRSGMFKAGW 302          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A1U8MUH5_GOSHI (probable purine permease 11 OS=Gossypium hirsutum OX=3635 GN=LOC107941422 PE=4 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.207e-73
Identity = 119/150 (79.33%), Postives = 129/150 (86.00%), Query Frame = 0
Query:  297 LGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW 446
            +GS GW   P+G +KFN+SG ALEGESGVGGVMRDEEG  RALFSGPSVACD E AEL AIIIAMDVFNDI  K SCSLI+EMGSR+V NWIL KSSRPWSQ+ +FAE+DRRRACA KLTF+ AE GGNEMADALAS GMSRPCLFKAWW
Sbjct:  380 IGSTGWCFSPIGCLKFNISGVALEGESGVGGVMRDEEGTARALFSGPSVACDAEYAELGAIIIAMDVFNDIGWKGSCSLIVEMGSREVLNWILEKSSRPWSQHPVFAELDRRRACARKLTFTLAEAGGNEMADALASAGMSRPCLFKAWW 529          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A0D2QBA7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G241900 PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 5.882e-64
Identity = 111/231 (48.05%), Postives = 147/231 (63.64%), Query Frame = 0
Query:  220 KIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCEL----SNLGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW 446
            K++   KS WL SI A+CW +WLARN +VF+ +++TM+ LIF SKMRALLW+R+  +E   QE  WW+CP RC +    S L +  W  PP G +KFNV G A E   G  GV+RD EG+  ALFSG   A DT+ AE+ A+++A+DVF  ++ K + SL IE+GS  VF W   KS RPWS    F  I+R       + FS  E+ GNEMA +LA  G++R  +FKAWW
Sbjct:    2 KMVEIRKSFWLISIPAACWIVWLARNGMVFERRMMTMENLIFQSKMRALLWIRSVYDESMLQENFWWICPNRCRIDSIKSKLTALIWHPPPHGCLKFNVCGIANEYRVGCEGVLRDNEGVAIALFSGSVTANDTDLAEIGAMMVALDVFLAMKWKLNDSLFIELGSLVVFYWCANKSMRPWSLQETFTNIERDIEKVRNIVFSTEEKNGNEMASSLAVVGINREEMFKAWW 232          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A2K1X772_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G126900v3 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.450e-47
Identity = 112/365 (30.68%), Postives = 171/365 (46.85%), Query Frame = 0
Query:   93 ILWDHEKDGEFSVKQLSKLLSEGEGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVR--------TATEECRFQERLWWLCPYRCELSNLGSAG--WRSPPLGGVKFNVSGAALE--GESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            ++W     G F VK L  LL+       VF F  IW+  VPP+V  F W+  I+++  +  L+KRG+ +  S   CP C  E E  DH+F +C      W +I NW  + W    N    +  +         K  W+    +  WSIWL RN+++F  K+   DTL F    R  LW++        ++++  R  E L      R   S     G  W  P     K+NV G+++E  G SG+GGV+R+  GI+  +FS      D+  AEL A+I A+++           +IIE  S  V +W+    +RPW  + +F+   R  +C   +T++++    N MAD LA   + R   F AW
Sbjct:    4 LVWKANNTGRFLVKSLYGLLNPSPPLNTVFFFRGIWRGLVPPKVEVFCWMTIINKINTRSMLVKRGI-LDTSAANCPICLVEEEMVDHLFIHCYKHWLIWSKIINWCGLAWCCPRNLPNLFSQWDSLVYGKFQKKAWVMLFFSVAWSIWLLRNDVIFKQKIPNYDTLFFLIVTRLCLWLKATEPDFPYSSSDLLRSAEGL-----IRWTNSQTLRTGVMWSPPMTNRFKWNVDGSSIEKPGPSGIGGVLRNHHGILLGIFSLSVGILDSNVAELRAVIKAIELSASNCFLHHKHIIIESDSANVISWMNNLHNRPWIHHKLFSSAQRLASCFDSITYTYSYRESNHMADHLAKQRVHRISDFVAW 362          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A1U8MV81_GOSHI (uncharacterized protein LOC107941688 OS=Gossypium hirsutum OX=3635 GN=LOC107941688 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 5.027e-37
Identity = 65/137 (47.45%), Postives = 90/137 (65.69%), Query Frame = 0
Query:  153 FLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCP 289
            F+ +RGV   +    CPWC    E A H+FF C FIAGFW+RIF WW++ W  V  F +F+ L    ++ G  K LWL +IAA+CW+IWLARN +  DN+ + M+ L+F +KMRALLW+R+  +E   +E LWW+ P
Sbjct:    3 FMARRGVCFQNVSLSCPWCEGVPECASHLFFQCKFIAGFWRRIFMWWEMGWKQVEGFSDFFALCNNVQMAGFRKRLWLIAIAATCWTIWLARNGLKIDNRRVCMENLMFLTKMRALLWIRSIHDEIMLKEDLWWISP 139          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A2U1KWE7_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA559960 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.839e-36
Identity = 108/399 (27.07%), Postives = 175/399 (43.86%), Query Frame = 0
Query:   57 WEDIFVRPLLDREMGILSRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEGEGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYR--------CELSNLGSAGWRSPPLGGVKFNVSGAA--LEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            W+    R L D E+         ++ ++LV    D+++W  E  G+FS K  S  +      G   +   IWK KVPP+ R   W +   ++P +  L + GV I ++ + CP C   +E  DH+F +C      W  +   W   W+   +  + ++ +     +  CK +W  +  +  W IW ARN+ VF  K +T   +I   K R   W++     C +    +++  +         C++     + W  P  G +KFNV G+A    G +G+GG++R+ EG+V ALFS P    D+  AE+ AI  A  + N     +S  ++IE  S    +W      RPW     F E+D   +     +        N  AD LA  G+ R      W
Sbjct:   20 WDVKLRRRLFDWEVDQFEAFSSLLNSMMLVASNADKVVWSFESSGKFSSKSFSYEVENMNYHGNPLL-SSIWKFKVPPKARLLCWQVLSGKLPTRALLSRIGV-ISENHHECPLCKGNVETIDHLFVHCKISLSIWWALVEGWGCMWVIPRSITDLFVWWKDMAKVIKCKEVWFMAFFSVLWHIWEARNKAVFSEKEVTSSQIIDLVKFRTGGWIKAFFPACSYSLLDFFVNIFSISVCFGDVCKVKR--PSQWCPPEDGSLKFNVDGSAKGKPGLAGIGGLLRNSEGVVVALFSMPVGIMDSNVAEVLAIKEASKMLNKKVEFNSVKIVIESDSLNAVSWTHTPIKRPWRFLPYFQEVDIFLSSCSSHSIVHVHRECNSDADKLAKDGVHRTSPLTIW 414          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: F4NCL3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.238e-35
Identity = 119/444 (26.80%), Postives = 191/444 (43.02%), Query Frame = 0
Query:   20 WLGDKNF-MDFPRLFRLAKLKYALVFDYSSYYGFS---NINWEDIFVRPLLDREMGILSRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEG--EGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVR--------TATEECRFQERLWW----LCPYRCELSNLGSAGWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            WLGD    + FPRLF +     A +    S+ G     N +W  +F RP    E   L  L+     V L P  +DR++W   K G FSVK  SK L+    + +  + ++ ++W+  +PPR+  F W+  + ++  +  L    +   D   VC  CN   E +DH+  +C F +  W      W++ W+   N  E +  ++  K     + +W +  +   W+IW  RN  +F     + + L     +R + W++        +  E  R  + L W      P    +S  G   W  P  G +K+NV  +   G S +GGV+R+ +GI   +FS P  + +  SAE+ AI  AM +           L++E  S     W       PW+       I   R     ++    +   N +ADALA  G+SR   F AW
Sbjct:  943 WLGDSPLKLRFPRLFTIVDNPMAYIASCGSWCGREWVWNFSWSRVF-RPRDAEEWEELQGLL---GSVCLSPSTDDRLIWTPHKSGAFSVKSCSKELTNTALKPQSKIRIWGRLWRGLIPPRIEVFSWVALLGKLNSRQKLATLNIIPPDDA-VCIMCNGAPETSDHLLLHCPFASSIWLWWLGIWNVSWVFPKNLFEAFEQWYCHKKNPFFRKVWCSIFSIIIWTIWKERNARIFRGISCSSNKLQDLVIIRLMWWIKGWGEAFPYSIVEVLRHPQCLSWDYLKAAPAATAVSVDGML-WSPPNDGVMKWNVDASVNAGRSAIGGVLRNSQGIFVCVFSCPIPSIEINSAEIIAIYRAMQICYSFEFLKRAPLVLESDSANAVMWSNENEGGPWNLNFQLNFIRNARKAGLNISIVHKKRSSNAVADALAKQGLSRTDDFLAW 1380          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A2U1Q365_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA006750 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.082e-34
Identity = 112/421 (26.60%), Postives = 177/421 (42.04%), Query Frame = 0
Query:   27 MDFPRLFRLAKLKYALVFDYSSYYGFSNINWEDIFVRPLLDREMGILSRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEGEGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCELSNLGSAGWRSPPLGGVKFNVSGAAL--EGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAW 445
            + FPR+F LA  K   V ++  ++     NW+  F R L D E+         ++ ++LV   +D+++W  E   +FS K     +      G   +   IWK KVPP+ R   W +   ++P++ FL + GV I ++   CP C   +E  DH+F +C      W  +   W   W+   +  + ++ +        CK +W  S  +    IW ARN+ VF  K ++   +I   K R   W                 CP               P  G +KFNV G+A    G +G+GG++R+ EG+V A+FS P    D+  AE+ A+  A  + N     +S  ++IE  S    +W      RPW     F ++D   +     +        N  AD LA  G  R      W
Sbjct:   47 VSFPRIFTLAIHKSGPVCNFG-FWEDGQWNWDVKFRRRLFDWEVEQYEAFSSLLNSMMLVASNDDKVVWSFESSDKFSSKSFGYEVENLNYHGNPLL-SSIWKFKVPPKARLLCWQVLSSKLPIRAFLSRIGV-ISENQRECPLCKGNVETIDHLFVHCKISLSIWWALVEGWGCMWVTPRSITDLFIWWKDMAKDIKCKEVWFMSFFSVLLHIWEARNKAVFSEKEVSSSQIIDLVK-RPFQW-----------------CP---------------PEDGSLKFNVDGSATGKPGLAGIGGLLRNSEGVVLAMFSIPVGIMDSNVAEVLALKEACKMLNKKVELNSVKIVIESDSLNAVSWTHAPIKRPWRLLPYFQKVDIFLSSCSSHSAIHVHRECNSDADKLAKDGGHRTSPLTIW 431          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A2U1PIX0_ARTAN (Reverse transcriptase OS=Artemisia annua OX=35608 GN=CTI12_AA137330 PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.087e-33
Identity = 100/409 (24.45%), Postives = 173/409 (42.30%), Query Frame = 0
Query:   29 FPRLFRLAKLKYALVFDYSSYYGFSNINWEDIFVRPLLDREMGILSRLIDRVSCVVLVPEVEDRILWDHEKDGEFSVKQLSKLLSEGEGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCELSNLGSAG-----------WRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAI--IIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGG 424
            FPR+F LA +K   V D+   +      W     R L D E+   +  +  ++ VV++    D+++W  +  G+FS +   K + +     P+     +WK K PP+     W   I ++P +D L++ G+ I ++ + CP C   +E  DH+  +C F    W  + + WD +W+   N    +        +  CK +W T+  +  W +W ARN+ +F + + +   ++   K R   WV+  +  C +      L  +   L ++ + G           W  P +G +KFNV GAA  G+SG             ALFS P     +  +E+  I  ++  D  N++                  +WI     RPW   S F EID   +  G  + +  +  G
Sbjct:   94 FPRIFALAAIKSGSVCDFG-LWDNGQWKWNVKLRRKLFDWEVEQFNSFMLTLNSVVMMATRNDKVVWSFDSLGKFSSRSFGKEMEKSNYSDPIL--HSVWKFKAPPKAHLLCWQSIISKLPTRDVLLRFGI-ISENQSRCPLCKSCIESVDHLSIHCKFTLSIWYALISGWDCEWVIPKNMRTLFSWLMDMAKVVKCKEVWQTTFFSVVWHVWEARNKAIFVDNISSFWQVLDLVKFRTGCWVKAFSPACPYS-----LLDFHVNLFSITTCGSTMKKNDHTQQWCPPVVGSLKFNVDGAA-RGKSGPA-----------ALFSIPLGVLYSNVSEVMEIKKLVGCDSLNEV------------------SWIRRPLERPWRLLSHFQEIDLFLSTNGNRSIAHIKREG 463          
BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Match: A0A061FFZ0_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034780 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.909e-32
Identity = 91/322 (28.26%), Postives = 143/322 (44.41%), Query Frame = 0
Query:  126 KIWKLKVPPRVRNFLWLLAIDRVPMKDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWDIDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFDNKVLTMDTLIFHSKMRALLWVR-------TATEECRFQERLWWLCPYRCELSNLGSAGWRSPPLGGVKFNVSGAAL--EGESGVGGVMRDEEGIVRALFSGPSVACDTESAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYSIFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSR 438
            ++WK   PP++  F W + + +V +K  L KRG+ I  + + C  CN ELE + H+FF C+     W    + W + W+   +   F++ +   K       +W     ++ WSIWL RNEI+F  K L ++ L     +R   W +              F+     +   +C+   + S  W  PP G  K NV G+AL   G +G+ G +RD E  ++ +FS P    D+  AE  AI   +  F       S +L +E  S+    W    +S PW    +   I+  +     LTF+      N +AD LA  G  R
Sbjct:   73 QLWKGHAPPKIEVFTWQVLLGKVAVKHELFKRGL-IDINTSFCTLCNAELETSSHLFFTCSVAWNIWMHNCSLWGLSWVHPGDATSFFVSWQNNKPPYGSPEIWHMLFFSTLWSIWLCRNEILFQGKHLDVNQLQDIILVRLAHWCKGKWPVNHIPASHFLFEPSRICINSRKCKTKVVCS--WMRPPTGSFKLNVDGSALGKPGPTGIRGAIRDHESFIKGVFSTPIGMEDSNYAEFLAIKEGLSFFFSSPWASS-TLHVESDSKNAITWASDHNSVPWRMKLLSNSIEAFKTSFKDLTFTHINREANALADGLAKAGAIR 390          
The following BLAST results are available for this feature:
BLAST of EVM_prediction_Ga09G2743 vs. NCBI nr
Analysis Date: 2019-03-07 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs NCBI nr)
Total hits: 10
Match NameE-valueIdentityDescription
gi|1050648613|ref|XP_017647654.1|3.180e-12576.02PREDICTED: uncharacterized protein LOC108487813 [G... [more]
gi|763816442|gb|KJB83294.1|4.229e-8448.20hypothetical protein B456_013G240100 [Gossypium ra... [more]
gi|1028974047|ref|XP_016730477.1|5.008e-7379.33PREDICTED: probable purine permease 11 [Gossypium ... [more]
gi|763749210|gb|KJB16649.1|7.003e-6448.05hypothetical protein B456_002G241900 [Gossypium ra... [more]
gi|1050567615|ref|XP_017604437.1|4.925e-6248.37PREDICTED: uncharacterized protein LOC108451233 [G... [more]
gi|1050604286|ref|XP_017624599.1|3.219e-6142.80PREDICTED: uncharacterized protein LOC108468219 [G... [more]
gi|1334280731|gb|PNS96609.1|5.297e-4730.68hypothetical protein POPTR_017G126900v3 [Populus t... [more]
gi|1028974605|ref|XP_016730751.1|5.984e-3747.45PREDICTED: uncharacterized protein LOC107941688 [G... [more]
gi|332322180|emb|CCA66188.1|1.474e-3526.80hypothetical protein [Beta vulgaris subsp. vulgari... [more]
gi|731368551|ref|XP_010696208.1|8.566e-3528.57PREDICTED: uncharacterized protein LOC104908756 [B... [more]
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BLAST of EVM_prediction_Ga09G2743 vs. TAIR10
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs arabidopsis TAIR10)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G25270.16.128e-1724.71| Symbols: | Ribonuclease H-like superfamily prot... [more]
AT3G09510.19.012e-1621.79| Symbols: | Ribonuclease H-like superfamily prot... [more]
AT4G29090.11.217e-1323.44| Symbols: | Ribonuclease H-like superfamily prot... [more]
AT2G02650.17.449e-1123.19| Symbols: | Ribonuclease H-like superfamily prot... [more]
AT2G04420.18.094e-723.77| Symbols: | Polynucleotidyl transferase, ribonuc... [more]
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BLAST of EVM_prediction_Ga09G2743 vs. ExPASy Swiss-Prot
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
RNHX1_ARATH1.013e-1326.40Putative ribonuclease H protein At1g65750 OS=Arabi... [more]
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BLAST of EVM_prediction_Ga09G2743 vs. ExPASy TrEMBL
Analysis Date: 2019-03-08 (BLASTP of CRI v1.0 Gossypium arboreum proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
A0A0D2VJG7_GOSRA3.552e-8448.20Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A1U8MUH5_GOSHI4.207e-7379.33probable purine permease 11 OS=Gossypium hirsutum ... [more]
A0A0D2QBA7_GOSRA5.882e-6448.05Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A2K1X772_POPTR4.450e-4730.68Uncharacterized protein OS=Populus trichocarpa OX=... [more]
A0A1U8MV81_GOSHI5.027e-3747.45uncharacterized protein LOC107941688 OS=Gossypium ... [more]
A0A2U1KWE7_ARTAN1.839e-3627.07Uncharacterized protein OS=Artemisia annua OX=3560... [more]
F4NCL3_BETVU1.238e-3526.80Uncharacterized protein OS=Beta vulgaris subsp. vu... [more]
A0A2U1Q365_ARTAN2.082e-3426.60Uncharacterized protein OS=Artemisia annua OX=3560... [more]
A0A2U1PIX0_ARTAN5.087e-3324.45Reverse transcriptase OS=Artemisia annua OX=35608 ... [more]
A0A061FFZ0_THECC3.909e-3228.26Uncharacterized protein OS=Theobroma cacao OX=3641... [more]
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InterPro
Analysis Name: InterProScan Analysis for CRI v1.0 Gossypium arboreum proteins
Date Performed: 2019-03-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 309..438
e-value: 4.9E-12
score: 48.0
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 317..433
e-value: 3.4E-8
score: 33.3
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 103..192
e-value: 3.1E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR25952:SF227SUBFAMILY NOT NAMEDcoord: 78..275
NoneNo IPR availablePANTHERPTHR25952FAMILY NOT NAMEDcoord: 78..275
NoneNo IPR availableCDDcd06222RNase_H_likecoord: 313..432
e-value: 1.31856E-11
score: 59.25
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 310..441

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Ga09G2743_CRI-A2_v1.0.a1 ID=evm.model.Ga09G2743_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga09G2743; organism=Gossypium arboreum; type=mRNA; length=1341bp
ATGTCAAAGGTGTGGAGAGGAATTGTTGAGAATTCATTGGATGCTAGTGT
GGTACAATGGTTAGGGGATAAAAATTTTATGGATTTCCCTAGGCTTTTTC
GTTTAGCTAAACTCAAATATGCTTTAGTGTTTGATTATTCGTCATACTAT
GGTTTTAGCAATATAAATTGGGAAGATATTTTCGTCAGACCTCTTTTGGA
TAGGGAGATGGGGATCCTTAGCCGGCTTATCGATAGGGTGAGTTGTGTTG
TTCTAGTTCCGGAGGTGGAGGATAGGATTTTATGGGATCATGAAAAGGAT
GGCGAGTTCTCAGTAAAGCAATTATCCAAGCTTCTGAGTGAGGGTGAGGG
GGAGGGGCCAGTCTTTGTCTTCGATAAAATATGGAAGCTAAAAGTTCCTC
CACGGGTGCGGAATTTTCTTTGGTTATTGGCCATTGATAGAGTTCCTATG
AAAGATTTTCTAATTAAAAGGGGGGTGAATATTCATGACAGCTTGAACGT
GTGCCCGTGGTGCAATAGGGAGTTGGAGAGGGCGGATCATGTATTTTTTA
ATTGTAATTTTATTGCAGGATTCTGGAAGAGAATATTCAACTGGTGGGAC
ATCGACTGGTTAGCAGTTAGCAATTTTGAGGAATTTTATATGCTATATTT
CAAGGCGAAGATTATTGGTTCTTGTAAAAGTTTGTGGCTAACTTCAATTG
CTGCATCTTGTTGGTCGATTTGGTTAGCAAGAAATGAGATTGTATTTGAT
AATAAAGTGTTGACAATGGACACTTTGATTTTCCATTCCAAAATGAGGGC
TTTACTATGGGTAAGGACTGCTACTGAAGAGTGCAGGTTTCAAGAGAGAT
TATGGTGGTTATGTCCGTATAGATGTGAATTATCTAATTTAGGGTCAGCC
GGCTGGCGCTCTCCTCCACTTGGAGGCGTGAAATTTAATGTAAGTGGTGC
TGCTCTTGAGGGTGAATCTGGCGTTGGAGGGGTAATGAGAGACGAGGAAG
GTATTGTTAGAGCTCTATTCTCGGGTCCGAGTGTTGCTTGTGATACGGAG
TCTGCTGAATTGGAAGCAATTATCATAGCTATGGATGTTTTTAATGACAT
AAGAAGGAAGGATTCATGCTCTCTAATTATTGAGATGGGGTCGAGGAAGG
TTTTTAATTGGATCTTAGGAAAATCAAGTAGACCTTGGTCGCAATATTCT
ATTTTTGCAGAAATTGATAGAAGGAGGGCCTGTGCTGGAAAGTTAACATT
TTCTTTTGCTGAGGAGGGTGGAAATGAAATGGCAGATGCCTTAGCTTCTA
CTGGTATGAGTAGACCTTGTTTGTTTAAGGCTTGGTGGTGA
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protein sequence of evm.model.Ga09G2743_CRI-A2_v1.0.a1

>evm.model.Ga09G2743_CRI-A2_v1.0.a1 ID=evm.model.Ga09G2743_CRI-A2_v1.0.a1; Name=evm.model.Ga09G2743_CRI-A2_v1.0.a1; organism=Gossypium arboreum; type=polypeptide; length=446bp
MSKVWRGIVENSLDASVVQWLGDKNFMDFPRLFRLAKLKYALVFDYSSYY
GFSNINWEDIFVRPLLDREMGILSRLIDRVSCVVLVPEVEDRILWDHEKD
GEFSVKQLSKLLSEGEGEGPVFVFDKIWKLKVPPRVRNFLWLLAIDRVPM
KDFLIKRGVNIHDSLNVCPWCNRELERADHVFFNCNFIAGFWKRIFNWWD
IDWLAVSNFEEFYMLYFKAKIIGSCKSLWLTSIAASCWSIWLARNEIVFD
NKVLTMDTLIFHSKMRALLWVRTATEECRFQERLWWLCPYRCELSNLGSA
GWRSPPLGGVKFNVSGAALEGESGVGGVMRDEEGIVRALFSGPSVACDTE
SAELEAIIIAMDVFNDIRRKDSCSLIIEMGSRKVFNWILGKSSRPWSQYS
IFAEIDRRRACAGKLTFSFAEEGGNEMADALASTGMSRPCLFKAWW
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mRNA from alignment at Chr09_CRI-A2_v1.0.a1:84347549..84348961+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Ga09G2743_CRI-A2_v1.0.a1 ID=evm.model.Ga09G2743_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga09G2743; organism=Gossypium arboreum; type=mRNA; length=1413bp; location=Sequence derived from: Chr09_CRI-A2_v1.0.a1:84347549..84348961+ (Gossypium arboreum
ATGTCAAAGGTGTGGAGAGGAATTGTTGAGAATTCATTGGATGCTAGTGT GGTACAATGGTTAGGGGATAAAAATTTTAGTTGGAAGATTGGGAATTGAA AGACGACATTATTTTGGGAGGATAAATGGTGCGGTAAGGACCCATTAAAA GTGGATTTCCCTAGGCTTTTTCGTTTAGCTAAACTCAAATATGCTTTAGT GTTTGATTATTCGTCATACTATGGTTTTAGCAATATAAATTGGGAAGATA TTTTCGTCAGACCTCTTTTGGATAGGGAGATGGGGATCCTTAGCCGGCTT ATCGATAGGGTGAGTTGTGTTGTTCTAGTTCCGGAGGTGGAGGATAGGAT TTTATGGGATCATGAAAAGGATGGCGAGTTCTCAGTAAAGCAATTATCCA AGCTTCTGAGTGAGGGTGAGGGGGAGGGGCCAGTCTTTGTCTTCGATAAA ATATGGAAGCTAAAAGTTCCTCCACGGGTGCGGAATTTTCTTTGGTTATT GGCCATTGATAGAGTTCCTATGAAAGATTTTCTAATTAAAAGGGGGGTGA ATATTCATGACAGCTTGAACGTGTGCCCGTGGTGCAATAGGGAGTTGGAG AGGGCGGATCATGTATTTTTTAATTGTAATTTTATTGCAGGATTCTGGAA GAGAATATTCAACTGGTGGGACATCGACTGGTTAGCAGTTAGCAATTTTG AGGAATTTTATATGCTATATTTCAAGGCGAAGATTATTGGTTCTTGTAAA AGTTTGTGGCTAACTTCAATTGCTGCATCTTGTTGGTCGATTTGGTTAGC AAGAAATGAGATTGTATTTGATAATAAAGTGTTGACAATGGACACTTTGA TTTTCCATTCCAAAATGAGGGCTTTACTATGGGTAAGGACTGCTACTGAA GAGTGCAGGTTTCAAGAGAGATTATGGTGGTTATGTCCGTATAGATGTGA ATTATCTAATTTAGGGTCAGCCGGCTGGCGCTCTCCTCCACTTGGAGGCG TGAAATTTAATGTAAGTGGTGCTGCTCTTGAGGGTGAATCTGGCGTTGGA GGGGTAATGAGAGACGAGGAAGGTATTGTTAGAGCTCTATTCTCGGGTCC GAGTGTTGCTTGTGATACGGAGTCTGCTGAATTGGAAGCAATTATCATAG CTATGGATGTTTTTAATGACATAAGAAGGAAGGATTCATGCTCTCTAATT ATTGAGATGGGGTCGAGGAAGGTTTTTAATTGGATCTTAGGAAAATCAAG TAGACCTTGGTCGCAATATTCTATTTTTGCAGAAATTGATAGAAGGAGGG CCTGTGCTGGAAAGTTAACATTTTCTTTTGCTGAGGAGGGTGGAAATGAA ATGGCAGATGCCTTAGCTTCTACTGGTATGAGTAGACCTTGTTTGTTTAA GGCTTGGTGGTGA
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Coding sequence (CDS) from alignment at Chr09_CRI-A2_v1.0.a1:84347549..84348961+

>evm.model.Ga09G2743_CRI-A2_v1.0.a1 ID=evm.model.Ga09G2743_CRI-A2_v1.0.a1; Name=EVM_prediction_Ga09G2743; organism=Gossypium arboreum; type=CDS; length=1341bp; location=Sequence derived from: Chr09_CRI-A2_v1.0.a1:84347549..84348961+ (Gossypium arboreum
ATGTCAAAGGTGTGGAGAGGAATTGTTGAGAATTCATTGGATGCTAGTGT
GGTACAATGGTTAGGGGATAAAAATTTTATGGATTTCCCTAGGCTTTTTC
GTTTAGCTAAACTCAAATATGCTTTAGTGTTTGATTATTCGTCATACTAT
GGTTTTAGCAATATAAATTGGGAAGATATTTTCGTCAGACCTCTTTTGGA
TAGGGAGATGGGGATCCTTAGCCGGCTTATCGATAGGGTGAGTTGTGTTG
TTCTAGTTCCGGAGGTGGAGGATAGGATTTTATGGGATCATGAAAAGGAT
GGCGAGTTCTCAGTAAAGCAATTATCCAAGCTTCTGAGTGAGGGTGAGGG
GGAGGGGCCAGTCTTTGTCTTCGATAAAATATGGAAGCTAAAAGTTCCTC
CACGGGTGCGGAATTTTCTTTGGTTATTGGCCATTGATAGAGTTCCTATG
AAAGATTTTCTAATTAAAAGGGGGGTGAATATTCATGACAGCTTGAACGT
GTGCCCGTGGTGCAATAGGGAGTTGGAGAGGGCGGATCATGTATTTTTTA
ATTGTAATTTTATTGCAGGATTCTGGAAGAGAATATTCAACTGGTGGGAC
ATCGACTGGTTAGCAGTTAGCAATTTTGAGGAATTTTATATGCTATATTT
CAAGGCGAAGATTATTGGTTCTTGTAAAAGTTTGTGGCTAACTTCAATTG
CTGCATCTTGTTGGTCGATTTGGTTAGCAAGAAATGAGATTGTATTTGAT
AATAAAGTGTTGACAATGGACACTTTGATTTTCCATTCCAAAATGAGGGC
TTTACTATGGGTAAGGACTGCTACTGAAGAGTGCAGGTTTCAAGAGAGAT
TATGGTGGTTATGTCCGTATAGATGTGAATTATCTAATTTAGGGTCAGCC
GGCTGGCGCTCTCCTCCACTTGGAGGCGTGAAATTTAATGTAAGTGGTGC
TGCTCTTGAGGGTGAATCTGGCGTTGGAGGGGTAATGAGAGACGAGGAAG
GTATTGTTAGAGCTCTATTCTCGGGTCCGAGTGTTGCTTGTGATACGGAG
TCTGCTGAATTGGAAGCAATTATCATAGCTATGGATGTTTTTAATGACAT
AAGAAGGAAGGATTCATGCTCTCTAATTATTGAGATGGGGTCGAGGAAGG
TTTTTAATTGGATCTTAGGAAAATCAAGTAGACCTTGGTCGCAATATTCT
ATTTTTGCAGAAATTGATAGAAGGAGGGCCTGTGCTGGAAAGTTAACATT
TTCTTTTGCTGAGGAGGGTGGAAATGAAATGGCAGATGCCTTAGCTTCTA
CTGGTATGAGTAGACCTTGTTTGTTTAAGGCTTGGTGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR002156RNaseH_domain
IPR026960RVT-Znf
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity