Gossypium barbadense - NCBI SRA datasets

RNA Datasets (as of 2/18/2016)

Organism Name Study Accession Cultivar Instrument Reference
Gossypium barbadense SRP057490 3-79 Illumina HiSeq 2000 Unpublished, ICR
Gossypium barbadense SRP049757

H1

Illumina HiSeq 2000

Unpublished, CAAS
Gossypium barbadense SRP049496 3-79 Illumina HiSeq 2000 Wang et al. 2015
Gossypium barbadense SRP049330 Unspecified Illumina HiSeq 2000 Tuttle et al. 2015
Gossypium barbadense SRP035371

Unspecified

Illumina HiSeq 2000 Chen et al. 2015
Gossypium barbadense SRP022981

TM-1

Illumina Genome Analyzer Hulse-Kemp et al. 2014
Gossypium barbadense SRP017082

Pima S-6

Peru

K101

Illumina HiSeq 2000 Paterson et al. 2012
Gossypium barbadense SRP012037 VH8-4602 454 GS FLX Titanium Unpublished, CIRAD
Gossypium barbadense SRP011398

Hai 15

Hai 15 V991

Hai 15 D07038

Illumina HiSeq 2000 Sun et al. 2013
Gossypium barbadense SRP008299

TX1348

TX1347

454 GS FLX Unpublished, UOKNOR
Gossypium barbadense SRP007975 Unspecified 454 GS FLX Unpublished, Alabama A&M University
Gossypium barbadense SRP004853 3-79 Illumina Genome Analyzer Unpublished, Huazhong Agricultural University
Gossypium barbadense SRP001603

K10

S6

PS6

454 GS FLX Titanium

Illumina Genome Analyzer

Illumina Genome Analyzer II

Unpublished, Brigham Young University

 

DNA Datasets (as of 2/18/2016)

Organism Name Study Accession Cultivar Instrument Reference
Gossypium barbadense SRP058182 Hai7124 Illumina HiSeq 2000 Unpublished, Nanjing Agricultural University
Gossypium barbadense SRP047301

Unknown

5904

8763

910

Ba3119

CCCP 1243

CCCP B154

CCCP B51

CCCP B9102

DJ-07-136

K388

9899-I

BuharaZTW

VIR-29TV

VIR-4TV

Coastland R4-4

Ashimouni

Giza 29

Giza 36

Giza 67

Giza 80

Karnak

Menoufi

Pima SJ-1

Illumina HiSeq 2000 Unpublished, Nanjing Agricultural University
Gossypium barbadense SRP047301

Pima SJ-2

Pima SJ-4

Seabrook

Yuma

Sudan chongrong mian

Huadonghaidaomian

West of Andes

Changrong 3

Changrong 5

H7124

Hai 92

Junhai 1

Shengli 1

Tuhai 2

Yuejin 1

Yunnan 8040-2

Xinhai 3

Xinhai 5

Xinhai 10

Xinhai 11

Xinhai 13

Xinhai 16

Illumina HiSeq 2000 Unpublished, Nanjing Agricultural University
Gossypium barbadense SRP047301

Xinhai 21

Xinhai 25

Xinhai 29

Xinhai 2

Xinhai 33

Tanguis

G. purpurascens

Kaiyuanlianhemumian

Kaiyuanlihemumian

Alabolihemumian

Yuanmoulihemumian

Illumina HiSeq 2000 Unpublished, Nanjing Agricultural University
Gossypium barbadense SRP045160 3-79 Illumina HiSeq 2500 Hulse-Kemp et al. 2015