Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1

Overview
Analysis NameGossypium raimondii (D5) 'GPD5lz' genome HAU_v1
MethodCanu ( v1.3)
SourceOxford Nanopore; Illumina ASM2569854 v1
Date performed2023-02-01

 

Global statistics

Genomic feature Gossypium arboreum 'GPD5lz' HAU.v1 (NCBI: ASM2569854v1)
Total sequence length 751,041,726
Total ungapped length 751,033,826
Gaps between scaffolds 0
Number of scaffolds 289
Scaffold N50 57,716,579
Scaffold L50 7
Number of contigs 368
Contig N50 17,043,680
Contig L50 18
Total number of chromosomes and plasmids 65
Number of component sequences (WGS or clone) 268

 

Publication

Wang, M. et al. Genomic innovation and regulatory rewiring during evolution of the cotton genus Gossypium. Nat. Genet. 2022 Dec;54(12):1959-1971. doi: 10.1038/s41588-022-01237-2. Epub 2022 Dec 6.       .