Ghicr24_D05G241800.1, Ghicr24_D05G241800.1_CRI-ZM24_v1 (mRNA) Gossypium hirsutum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ghicr24_D05G241800.1 vs. Araport11
Match: gnl|BL_ORD_ID|14105 (AT2G16030.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | Chr2:6974196-6974891 REVERSE LENGTH=231 | 201606) HSP 1 Score: 258.07 bits (658), Expect = 1.569e-87 Identity = 120/229 (52.40%), Postives = 159/229 (69.43%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMT------------------QNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKAS 211
ME+ ++K VS V ++I T+++ + LQTPKTCI P A KPH FP STCDS+PR +LPL KKNAR+WSS +W + QNH+K LC+SAGAGH +MALS++GL +V VEL++S+PLV RA+PHNLPFFDG FD AFT HL AL+P + EEMERTVR GG CVV VDECG ++V++I RLF S+++ ++VTL G + T I+ + + S
Sbjct: 1 MERNVEKMLKRVSIVFLSIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCDSSPRQHLPLPKKNARIWSSGAWKSRLYSFSTYFLRFRDLGFIQNHTKALCLSAGAGHALMALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTAHLAEALFPWQFVEEMERTVRRGGFCVVSVDECGGDDVRDIARLFHNSKVVDVANVTLEGSKKTSILFKVQDS 229
BLAST of Ghicr24_D05G241800.1 vs. Araport11
Match: gnl|BL_ORD_ID|34563 (AT4G26730.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | Chr4:13472579-13473309 FORWARD LENGTH=208 | 201606) HSP 1 Score: 157.918 bits (398), Expect = 2.116e-48 Identity = 93/229 (40.61%), Postives = 128/229 (55.90%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMT------------------QNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKAS 211
ME+ ++K N VS V ++I T+++ +LPL KKNAR+W S +W + QNH+K LC+S GAGH MALS++GL +V VEL++S+PLV RA+PHNLPFFD FD FT HL AL+P R EEMERTVR GG CVV VDEC ++V++I R F S+++ ++VTL + T I+ + + S
Sbjct: 1 MERNVEKMLNRVSVVFLSIGTVLM-----------------------------------HLPLPKKNARIWFSGAWKSRLSSFSTYFLRFRDLGFIQNHTKALCLSDGAGHAPMALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDRVFDFVFTAHLAEALFPWRFVEEMERTVRRGGFCVVAVDECSGDDVRDIARFFHNSKIVDVANVTLERVKRTSILFKLQDS 194
BLAST of Ghicr24_D05G241800.1 vs. Araport11
Match: gnl|BL_ORD_ID|34170 (AT4G24805.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | Chr4:12785315-12786058 FORWARD LENGTH=247 | 201606) HSP 1 Score: 86.2705 bits (212), Expect = 2.372e-20 Identity = 51/167 (30.54%), Postives = 85/167 (50.90%), Query Frame = 0
Query: 69 RLWSSKSW------------------MTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEE---------VKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRK 208
++W+++ W + N SK L + A G EV AL +G+++ +G++L+ PLV + + H PF + FD F+ ALYP + E+ERT++ GGVCV+ V G+ + VK +V+LF+RS+++ + G T I+ RK
Sbjct: 79 KVWTTRDWDRKVRVFSTFFRRLSDRGLLSNQSKALSIGARVGQEVAALRLIGVEDSVGIDLVPRPPLVVKGDFHAQPFDEETFDFEFSNVFDHALYPEKFVGEIERTLKPGGVCVLHVSISGKTDKYSANDLLSVKPLVKLFKRSKVVEMRKIDGFGLD-TEIVFRK 244
BLAST of Ghicr24_D05G241800.1 vs. Araport11
Match: gnl|BL_ORD_ID|4603 (AT1G24480.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | Chr1:8676440-8677159 REVERSE LENGTH=239 | 201606) HSP 1 Score: 84.7297 bits (208), Expect = 7.948e-20 Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = 0
Query: 77 MTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVV------DECGEEE---VKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKK 209
+ SK LC+ A G EV AL ++G+ + +G++L+ PLV + + H+ PF D FD F+ ALYP + E+ERT+R GG+CV+ V D+ + V+ +V+LFR+S ++ +V G T ++ RKK
Sbjct: 90 LLSKDSKCLCLGARVGQEVEALKRVGVNDSVGMDLVPYPPLVVKGDFHHQPFDDETFDFEFSNVFDHALYPDKFVGEIERTLRPGGLCVLHVALSTRSDKYSANDLFSVEALVKLFRQSEVVHVRNVDGFGLD-TEVVFRKK 230
BLAST of Ghicr24_D05G241800.1 vs. Araport11
Match: gnl|BL_ORD_ID|37283 (AT5G01710.1 | methyltransferase | Chr5:263709-265250 REVERSE LENGTH=513 | 201606) HSP 1 Score: 74.7146 bits (182), Expect = 1.658e-15 Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 0
Query: 81 HSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTG--HLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDV 194
SK LCV G EV +L ++G+KN +G+ S PLV R H +PF D AFD F+G L +L L A+E+ RT++ G VV V + LF RL+ D+
Sbjct: 110 ESKTLCVETAIGQEVHSLREIGVKNSVGISKKASRPLVVRGEGHAIPFEDNAFDFVFSGGDRLGKSLKQLEFADEITRTLKPEGFAVVHVGATDTYSFNSFLDLFNSCRLVKMRDI 225
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|823226719|ref|XP_012446186.1| (PREDICTED: uncharacterized protein LOC105769834 [Gossypium raimondii] >gi|763792431|gb|KJB59427.1| hypothetical protein B456_009G254500 [Gossypium raimondii]) HSP 1 Score: 423.32 bits (1087), Expect = 1.913e-149 Identity = 209/230 (90.87%), Postives = 211/230 (91.74%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMT------------------QNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 212
MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRH+LPLSKKNARLWSSKSW T +NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD
Sbjct: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHHLPLSKKNARLWSSKSWTTRVSSFVQFFTQLYQNGLLKNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 230
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|1050572077|ref|XP_017606851.1| (PREDICTED: uncharacterized protein LOC108453328 [Gossypium arboreum] >gi|1050572079|ref|XP_017606853.1| PREDICTED: uncharacterized protein LOC108453328 [Gossypium arboreum] >gi|1050572081|ref|XP_017606854.1| PREDICTED: uncharacterized protein LOC108453328 [Gossypium arboreum]) HSP 1 Score: 417.542 bits (1072), Expect = 4.074e-147 Identity = 205/228 (89.91%), Postives = 208/228 (91.23%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKA 210
MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ NHSK LCVSAGAGH+VMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRS+LLS SDVTLNGRRVTRIIMRKK+
Sbjct: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQVSSFTQFFTQLYQNGLLKNHSKALCVSAGAGHDVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSQLLSFSDVTLNGRRVTRIIMRKKS 228
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|728819020|gb|KHG03008.1| (Phosphate acyltransferase [Gossypium arboreum]) HSP 1 Score: 398.667 bits (1023), Expect = 7.848e-138 Identity = 196/219 (89.50%), Postives = 199/219 (90.87%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV 201
MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ NHSK LCVSAGAGH+VMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRS+LLS SDVTLNGRR+
Sbjct: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQVSSFTQFFTQLYQNGLLKNHSKALCVSAGAGHDVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSQLLSFSDVTLNGRRI 219
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|1269912530|ref|XP_022767900.1| (uncharacterized protein LOC111312140 [Durio zibethinus] >gi|1269912532|ref|XP_022767901.1| uncharacterized protein LOC111312140 [Durio zibethinus] >gi|1269912534|ref|XP_022767902.1| uncharacterized protein LOC111312140 [Durio zibethinus] >gi|1269912536|ref|XP_022767903.1| uncharacterized protein LOC111312140 [Durio zibethinus] >gi|1269912538|ref|XP_022767904.1| uncharacterized protein LOC111312140 [Durio zibethinus]) HSP 1 Score: 351.288 bits (900), Expect = 7.641e-121 Identity = 170/229 (74.24%), Postives = 190/229 (82.97%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKAS 211
ME+ +Q+F N+VSFVSIT+ATL + F FLQTPKTCIPP+A QKPHLRFP S CDS+PRHYLPL KKNA LWSSKSWMTQ NHSKVLCVSAGAGHEVM+L+KMGL++V G+ELIESLPLVSRA+PHNLPFFDGAFDVAFTGHL ALYP++ A EMERTVR GG+CVVVVDE G+EEVKEIVRLFRRSR L SS+VTLNGR+VTRIIMR K S
Sbjct: 1 MERHVQRFLNKVSFVSITVATLTLLFFFLQTPKTCIPPNAPQKPHLRFPKSICDSSPRHYLPLPKKNACLWSSKSWMTQVSSFTQFFTYLYQMGLPKNHSKVLCVSAGAGHEVMSLTKMGLEDVTGIELIESLPLVSRADPHNLPFFDGAFDVAFTGHLPEALYPMQYAGEMERTVRKGGMCVVVVDEGGDEEVKEIVRLFRRSRFLGSSNVTLNGRKVTRIIMRTKVS 229
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|1137247309|gb|OMP05773.1| (Methyltransferase type 11 [Corchorus olitorius]) HSP 1 Score: 345.895 bits (886), Expect = 8.427e-117 Identity = 167/230 (72.61%), Postives = 189/230 (82.17%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 212
ME+ IQ+F N+VSFVS TIATLI+ FLFLQTP+TCIPP+A KPHLRFP STCDS+PRHYLPL KKNARLWSSK+W+ Q NHSKVLCVSAGAGHEVMALSKMG+++V GVELIESLPLVSRA+P NLPFFDG+FD+AF+GH ALYP R AEEMERTVR GGVCVVVVD CG EEVKEIVRLF+RS L+ SS+VT+NGRRVTRII R +AS+
Sbjct: 132 MERHIQRFLNKVSFVSFTIATLILVFLFLQTPETCIPPNAPIKPHLRFPKSTCDSSPRHYLPLPKKNARLWSSKAWINQVSSFTKFFTQLYHIGILKNHSKVLCVSAGAGHEVMALSKMGIEDVTGVELIESLPLVSRADPLNLPFFDGSFDIAFSGHFAEALYPSRYAEEMERTVRKGGVCVVVVDACGNEEVKEIVRLFKRSTLVGSSNVTMNGRRVTRIISRIRASN 361
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|508724837|gb|EOY16734.1| (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative [Theobroma cacao]) HSP 1 Score: 338.191 bits (866), Expect = 1.219e-115 Identity = 165/229 (72.05%), Postives = 186/229 (81.22%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKAS 211
ME+ IQ+F N+VS +SITIAT+ + FLFLQTP+TCIP KPHLRFP STCDS+PRHYLPL KKN RLWSSKSW+TQ HSKVLCVSAGAGHEVMALSKMG+++V GVE+IESLPLVS+A+PHNLPFFDGAFDVAFTGHL+ ALYP R A EMERTVR GGVCVVVVDECG+EEVKEIV LFRRSRL+ +S+VTLN RRVTRII+R AS
Sbjct: 1 MERHIQRFLNKVSLLSITIATITLLFLFLQTPETCIPHDTTLKPHLRFPKSTCDSSPRHYLPLPKKNTRLWSSKSWITQVSSFTQLFTQLYKMGLLKKHSKVLCVSAGAGHEVMALSKMGVEDVTGVEVIESLPLVSKADPHNLPFFDGAFDVAFTGHLVEALYPRRYAGEMERTVREGGVCVVVVDECGDEEVKEIVWLFRRSRLVGTSNVTLNRRRVTRIILRTIAS 229
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|1137240262|gb|OMP01046.1| (Methyltransferase type 11 [Corchorus capsularis]) HSP 1 Score: 338.191 bits (866), Expect = 1.246e-115 Identity = 164/230 (71.30%), Postives = 188/230 (81.74%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 212
ME+ IQ+F N+VSFVS TIATLI+ FLFLQTP+TCIPP+A KPHLRFP STCDS+PRHYLPL KKNARLWSSK+W+ Q NHSKVLCVSAGAGHEVMALSK+G+++V GVELIESLPLVSRA+P NLPFFDG+FD+AF+GH ALYP R AEEMERTVR GGV +VVVD CG EEVKEIVRLF+RS L+ SS+VT+NGRRVTRII R +AS+
Sbjct: 1 MERHIQRFLNKVSFVSFTIATLILVFLFLQTPETCIPPNAPIKPHLRFPKSTCDSSPRHYLPLPKKNARLWSSKTWINQVSSFTQFFIQLYHIGILKNHSKVLCVSAGAGHEVMALSKIGIEDVTGVELIESLPLVSRADPLNLPFFDGSFDIAFSGHFAEALYPSRYAEEMERTVRKGGVYLVVVDACGSEEVKEIVRLFKRSTLVGSSNVTMNGRRVTRIISRIRASN 230
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|1269922899|ref|XP_022773395.1| (uncharacterized protein LOC111315715 [Durio zibethinus] >gi|1269922901|ref|XP_022773396.1| uncharacterized protein LOC111315715 [Durio zibethinus] >gi|1269922903|ref|XP_022773397.1| uncharacterized protein LOC111315715 [Durio zibethinus]) HSP 1 Score: 330.487 bits (846), Expect = 1.087e-112 Identity = 170/229 (74.24%), Postives = 188/229 (82.10%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKAS 211
ME+ IQ+F N+VSFVSIT A+L + FLFLQTP+TCI P A KPHLRFP STCDS+PRHYLPL KKNARLWSSKSWMTQ N SKVLCVSAGAGHEVMALSKMGL++V GVELIESLPLVSRA+PHNLPFFDGAFDVAFT HL +LYP++ A EMERTVR GG+CVVVV+EC EEEVKE+VRLFRRSRLL S+DVTLNGRR+TRIIMR K S
Sbjct: 1 MERHIQRFLNKVSFVSITAASLTLLFLFLQTPETCISPDAPLKPHLRFPKSTCDSSPRHYLPLPKKNARLWSSKSWMTQVSSFTQFFTQLYQMGLLMNQSKVLCVSAGAGHEVMALSKMGLEDVTGVELIESLPLVSRADPHNLPFFDGAFDVAFTSHLAESLYPMQYAGEMERTVRKGGLCVVVVNECDEEEVKEVVRLFRRSRLLGSADVTLNGRRMTRIIMRTKVS 229
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|1344107548|gb|PPD81370.1| (hypothetical protein GOBAR_DD21696 [Gossypium barbadense]) HSP 1 Score: 322.783 bits (826), Expect = 3.255e-110 Identity = 156/170 (91.76%), Postives = 159/170 (93.53%), Query Frame = 0
Query: 32 PKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV 201
P C P ++L+ PNSTCDSTP HYLPLSKKNARLWSSKSWMTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV
Sbjct: 3 PTKCSPKASLE-----IPNSTCDSTPHHYLPLSKKNARLWSSKSWMTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV 167
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Match: gi|1137247160|gb|OMP05700.1| (Methyltransferase type 11 [Corchorus capsularis]) HSP 1 Score: 313.153 bits (801), Expect = 6.759e-101 Identity = 150/205 (73.17%), Postives = 167/205 (81.46%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSR 187
ME+ IQ+F N+VSFVS TIATLI+ FLFLQTP+TCIPP+A KPHLRFP STCDS+PRHYLPL KKNARLWSSK+W+ Q NHSKVLCVSAGAGHEVMALSKMG+++V GVELIESLPLVSRA+P NLPFFDG+FD+AF+GH ALYP R AEEMERTVR GGVCVVVVD CG EEVKEIVRLF+R R
Sbjct: 1 MERHIQRFLNKVSFVSFTIATLILVFLFLQTPETCIPPNAPIKPHLRFPKSTCDSSPRHYLPLPKKNARLWSSKTWINQVSSFTQFFTQLYHIGILMNHSKVLCVSAGAGHEVMALSKMGIEDVTGVELIESLPLVSRADPLNLPFFDGSFDIAFSGHFAEALYPSRYAEEMERTVRKGGVCVVVVDACGNEEVKEIVRLFKRHR 205
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A0D2QMZ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G254500 PE=4 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 1.607e-149 Identity = 209/230 (90.87%), Postives = 211/230 (91.74%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMT------------------QNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 212
MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRH+LPLSKKNARLWSSKSW T +NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD
Sbjct: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHHLPLSKKNARLWSSKSWTTRVSSFVQFFTQLYQNGLLKNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 230
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A0B0MLJ6_GOSAR (Phosphate acyltransferase OS=Gossypium arboreum OX=29729 GN=F383_26053 PE=4 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 6.592e-138 Identity = 196/219 (89.50%), Postives = 199/219 (90.87%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV 201
MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ NHSK LCVSAGAGH+VMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRS+LLS SDVTLNGRR+
Sbjct: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQVSSFTQFFTQLYQNGLLKNHSKALCVSAGAGHDVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSQLLSFSDVTLNGRRI 219
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A1R3KFB5_9ROSI (Methyltransferase type 11 OS=Corchorus olitorius OX=93759 GN=COLO4_08562 PE=4 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 7.079e-117 Identity = 167/230 (72.61%), Postives = 189/230 (82.17%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 212
ME+ IQ+F N+VSFVS TIATLI+ FLFLQTP+TCIPP+A KPHLRFP STCDS+PRHYLPL KKNARLWSSK+W+ Q NHSKVLCVSAGAGHEVMALSKMG+++V GVELIESLPLVSRA+P NLPFFDG+FD+AF+GH ALYP R AEEMERTVR GGVCVVVVD CG EEVKEIVRLF+RS L+ SS+VT+NGRRVTRII R +AS+
Sbjct: 132 MERHIQRFLNKVSFVSFTIATLILVFLFLQTPETCIPPNAPIKPHLRFPKSTCDSSPRHYLPLPKKNARLWSSKAWINQVSSFTKFFTQLYHIGILKNHSKVLCVSAGAGHEVMALSKMGIEDVTGVELIESLPLVSRADPLNLPFFDGSFDIAFSGHFAEALYPSRYAEEMERTVRKGGVCVVVVDACGNEEVKEIVRLFKRSTLVGSSNVTMNGRRVTRIISRIRASN 361
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A061FQF1_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_035616 PE=4 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 1.024e-115 Identity = 165/229 (72.05%), Postives = 186/229 (81.22%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKAS 211
ME+ IQ+F N+VS +SITIAT+ + FLFLQTP+TCIP KPHLRFP STCDS+PRHYLPL KKN RLWSSKSW+TQ HSKVLCVSAGAGHEVMALSKMG+++V GVE+IESLPLVS+A+PHNLPFFDGAFDVAFTGHL+ ALYP R A EMERTVR GGVCVVVVDECG+EEVKEIV LFRRSRL+ +S+VTLN RRVTRII+R AS
Sbjct: 1 MERHIQRFLNKVSLLSITIATITLLFLFLQTPETCIPHDTTLKPHLRFPKSTCDSSPRHYLPLPKKNTRLWSSKSWITQVSSFTQLFTQLYKMGLLKKHSKVLCVSAGAGHEVMALSKMGVEDVTGVEVIESLPLVSKADPHNLPFFDGAFDVAFTGHLVEALYPRRYAGEMERTVREGGVCVVVVDECGDEEVKEIVWLFRRSRLVGTSNVTLNRRRVTRIILRTIAS 229
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A1R3K1T5_COCAP (Methyltransferase type 11 OS=Corchorus capsularis OX=210143 GN=CCACVL1_03186 PE=4 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 1.047e-115 Identity = 164/230 (71.30%), Postives = 188/230 (81.74%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKASD 212
ME+ IQ+F N+VSFVS TIATLI+ FLFLQTP+TCIPP+A KPHLRFP STCDS+PRHYLPL KKNARLWSSK+W+ Q NHSKVLCVSAGAGHEVMALSK+G+++V GVELIESLPLVSRA+P NLPFFDG+FD+AF+GH ALYP R AEEMERTVR GGV +VVVD CG EEVKEIVRLF+RS L+ SS+VT+NGRRVTRII R +AS+
Sbjct: 1 MERHIQRFLNKVSFVSFTIATLILVFLFLQTPETCIPPNAPIKPHLRFPKSTCDSSPRHYLPLPKKNARLWSSKTWINQVSSFTQFFIQLYHIGILKNHSKVLCVSAGAGHEVMALSKIGIEDVTGVELIESLPLVSRADPLNLPFFDGSFDIAFSGHFAEALYPSRYAEEMERTVRKGGVYLVVVDACGSEEVKEIVRLFKRSTLVGSSNVTMNGRRVTRIISRIRASN 230
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A2P5R3I9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD21696 PE=4 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 2.734e-110 Identity = 156/170 (91.76%), Postives = 159/170 (93.53%), Query Frame = 0
Query: 32 PKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV 201
P C P ++L+ PNSTCDSTP HYLPLSKKNARLWSSKSWMTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV
Sbjct: 3 PTKCSPKASLE-----IPNSTCDSTPHHYLPLSKKNARLWSSKSWMTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRV 167
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A1R3KF39_COCAP (Methyltransferase type 11 OS=Corchorus capsularis OX=210143 GN=CCACVL1_01845 PE=4 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 5.678e-101 Identity = 150/205 (73.17%), Postives = 167/205 (81.46%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSWMTQ------------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSR 187
ME+ IQ+F N+VSFVS TIATLI+ FLFLQTP+TCIPP+A KPHLRFP STCDS+PRHYLPL KKNARLWSSK+W+ Q NHSKVLCVSAGAGHEVMALSKMG+++V GVELIESLPLVSRA+P NLPFFDG+FD+AF+GH ALYP R AEEMERTVR GGVCVVVVD CG EEVKEIVRLF+R R
Sbjct: 1 MERHIQRFLNKVSFVSFTIATLILVFLFLQTPETCIPPNAPIKPHLRFPKSTCDSSPRHYLPLPKKNARLWSSKTWINQVSSFTQFFTQLYHIGILMNHSKVLCVSAGAGHEVMALSKMGIEDVTGVELIESLPLVSRADPLNLPFFDGSFDIAFSGHFAEALYPSRYAEEMERTVRKGGVCVVVVDACGNEEVKEIVRLFKRHR 205
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A0A0K6X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045500 PE=4 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 3.583e-92 Identity = 132/228 (57.89%), Postives = 168/228 (73.68%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSW------------------MTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMRKKA 210
ME+ I++F N++SF SI IATL + LFLQTP+TCIPP++ KPHL+FP S+CDSTPR + + KKN RLWSS W + NH+KV+CVSAGAGHEVMALS+MG+ +V GVELI+S PLVSRA+PHNLPFFD FD+AFT HL AL+P R EMER VR GVCV+VV+ECG+ EVKEIV LF +SR ++S +VTL G ++TRI+M++ +
Sbjct: 1 MERHIRRFLNKLSFASIAIATLTLIILFLQTPQTCIPPNSPSKPHLKFPKSSCDSTPRELVSIDKKNKRLWSSNDWKKKLSSFIHFFQSIQDLGLLHNHTKVICVSAGAGHEVMALSQMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSRFVSEMERAVRPDGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: B9I6K4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G152100v3 PE=4 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 1.927e-88 Identity = 132/224 (58.93%), Postives = 165/224 (73.66%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSA-LQKPHLRFPNSTCDSTPRH-YLPLSKKNARLWSSKSWMTQ---------------NHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMR 207
MEK I+ F N+VS V ITIAT+ + +L+L TP+TCIPP+ + KPHL+FP+STCD + H Y +KK +LWSSKSW++Q N +KVLCVSAGAGHEVMAL+ MG+ +V GVE+++SLPLV RA+P+NLPFFDG FD+AF+ HL AL+PLR EMERTVRNGGVCVV V ECG EEV I RLFR+S + + +VTL G R+TRIIMR
Sbjct: 1 MEKHIENFLNKVSLVFITIATITLLYLYLHTPETCIPPNTPITKPHLKFPSSTCDPSLNHPYTDPTKKRLKLWSSKSWLSQVSSFTIFFQSLNLLNNKTKVLCVSAGAGHEVMALNNMGVSDVTGVEIVDSLPLVKRADPNNLPFFDGVFDLAFSAHLEEALFPLRIVGEMERTVRNGGVCVVAVKECGGEEVDAIARLFRKSMFVGAENVTLIGMRMTRIIMR 224
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Match: A0A251Q419_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G223700 PE=4 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.370e-88 Identity = 128/225 (56.89%), Postives = 159/225 (70.67%), Query Frame = 0
Query: 1 MEKQIQKFQNEVSFVSITIATLIITFLFLQTPKTCIPPSALQKPHLRFPNSTCDSTPRHYLPLSKKNARLWSSKSW------------------MTQNHSKVLCVSAGAGHEVMALSKMGLKNVIGVELIESLPLVSRANPHNLPFFDGAFDVAFTGHLMAALYPLRNAEEMERTVRNGGVCVVVVDECGEEEVKEIVRLFRRSRLLSSSDVTLNGRRVTRIIMR 207
ME+ IQ F +S+VSITI T+ L L+TP TC+ P + KPHLRFP S+CDS+PR LPL KKN RLWS+K+W + N SKVLCVSAGAGHEVMAL+++G+ +V G+EL++S PLVSRA+PHNLPFFD FD+ F+ H A++P R EMERTVR GGVCVVVVDECG+EEV+EIV LF S L + +VTL G R+TRIIM+
Sbjct: 1 MERHIQMFLKRLSYVSITIGTITFILLLLKTPDTCVAPDSPPKPHLRFPKSSCDSSPRELLPLHKKNKRLWSTKTWQNKVQSFSNFFRACYQMGLLHNDSKVLCVSAGAGHEVMALNQLGVADVTGIELLDSPPLVSRADPHNLPFFDDVFDLGFSAHFAKAMFPNRFVSEMERTVRAGGVCVVVVDECGDEEVREIVDLFTNSSFLGALNVTLTGLRMTRIIMK 225 The following BLAST results are available for this feature:
BLAST of Ghicr24_D05G241800.1 vs. ExPASy Swiss-Prot
Analysis Date: 2019-09-19 (BLASTP of ZM24-CRI v1.0.a1 Gossypium hirsutum proteins vs UniProt Swissprot) Total hits: 0
BLAST of Ghicr24_D05G241800.1 vs. Araport11
Analysis Date: 2019-09-19 (BLASTP of ZM24-CRI v1.0.a1 Gossypium hirsutum proteins vs arabidopsis Araport11) Total hits: 5
BLAST of Ghicr24_D05G241800.1 vs. NCBI nr
Analysis Date: 2019-09-19 (BLASTP of ZM24-CRI v1.0.a1 Gossypium hirsutum proteins vs NCBI nr) Total hits: 10
BLAST of Ghicr24_D05G241800.1 vs. ExPASy TrEMBL
Analysis Date: 2019-09-26 (BLASTP of ZM24-CRI v1.0.a1 Gossypium hirsutum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for ZM24-CRI v1.0.a1 Gossypium hirsutum proteins
Date Performed: 2019-09-18
Sequences
The
following sequences are available for this feature:
protein sequence of Ghicr24_D05G241800.1_CRI-ZM24_v1 >Ghicr24_D05G241800.1_CRI-ZM24_v1 ID=Ghicr24_D05G241800.1_CRI-ZM24_v1; Name=Ghicr24_D05G241800.1_CRI-ZM24_v1; organism=Gossypium hirsutum; type=polypeptide; length=213bpback to top mRNA from alignment at D05:22580246..22580934+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ghicr24_D05G241800.1_CRI-ZM24_v1 ID=Ghicr24_D05G241800.1_CRI-ZM24_v1; Name=Ghicr24_D05G241800.1; organism=Gossypium hirsutum; type=mRNA; length=689bp; location=Sequence derived from: D05:22580246..22580934+ (Gossypium hirsutumback to top Coding sequence (CDS) from alignment at D05:22580246..22580934+ >Ghicr24_D05G241800.1_CRI-ZM24_v1 ID=Ghicr24_D05G241800.1_CRI-ZM24_v1; Name=Ghicr24_D05G241800.1; organism=Gossypium hirsutum; type=CDS; length=639bp; location=Sequence derived from: D05:22580246..22580934+ (Gossypium hirsutumback to top |