rna-gnl|WGS:JABEZZ|Gorai_00003390-RA

Transcript Overview
Namerna-gnl|WGS:JABEZZ|Gorai_00003390-RA
Unique Namerna-Gorai_00003390-RA_D5_ISU_v1
TypemRNA
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length948
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr09chromosomeChr09:25521364..25523923 -Gossypium raimondii (D5) 'D5-8' genome ISU_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
abdriL0173Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
acdriL0225Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
awdriL0095Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
acdriL0568Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
bzdriL0080Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
acdriL0934Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
awdriL0715Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
awdriL0821Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
bhdriL0980Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
addriL0912Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
bzdriL0788Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bzdriL0896Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
bhdriL2198Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
addriL1991Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
bzdriL1984Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
dfidriL312Gossypium aridum (D4) genome ISU_v1Gossypium aridum
drirjR797Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
drirbR1517Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
drihwR1155Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
drihnR1471Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
drihnR1558Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
drihjR1350Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
drihjR1416Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
drigauR938Gossypium australe (G2) genome CRI_v1.1Gossypium australe
drigauR941Gossypium australe (G2) genome CRI_v1.1Gossypium australe
drigbR1073Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
drighR1039Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
drigdR1234Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
drighR1101Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
drigdR1301Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
drigbR1141Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
drightR1337Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
drightR1409Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
drighzR1201Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
drighzR1272Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
dridsiR669Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
dridsiR671Gossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
drigtiR1068Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
drigtiR1150Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
drihbR1929Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
drihbR1965Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
drigrbR1014Gossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
drihbR2079Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
drihbR2124Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
drigtbR1108Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
drigtbR1109Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
dridtR942Gossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
drihgsR1154Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
drihgsR1218Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
dridtoR754Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dridtoR792Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
dridttR776Gossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
drifnR1078Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
dritoR1119Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
dritoR1186Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
driuhR1158Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
driuhR1225Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
dritwR1502Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
dritwR1514Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
drihzR1355Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
drihzR1398Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
drihzR1469Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
dqidriL388Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
drigrhR1075Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
drigrhR1082Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
drigrzR889Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1Gossypium raimondii

Orthologs
Gene/TranscriptAssemblySpecies
gene-E1A91_D05G334500v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
GB_A05G3189Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
Gbscaffold2056.5.0Gossypium barbadense (AD2) '3-79' genome HAU_v1Gossypium barbadense
Gohir.D05G307900.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
EVM_prediction_Ga05G3370Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1Gossypium arboreum
rna-gnl|WGS:VKDL|Gobar.A05G323800.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Gbar_A05G030700.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
Gh_A05G2658Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Gohir.D05G307900.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gohir.A05G307600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gh_D05G310500.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
EVM0003303.1Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
rna-gnl|WGS_VKGE|Gotom.D05G346100.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
rna-gnl|WGS:JABFAE|Goarm_00003194-RAGossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
Gothu.00003673-RAGossypium thurberi (D1-35) genome ISU_v1Gossypium thurberi
gene-E1A91_A05G335200v1-mRNA1Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
Ghe05G34310Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Ghir_A05G031700.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gene-EPI10_009358-mRNA1Gossypium australe (G2) genome CRI_v1.1Gossypium australe
GB_D05G3173Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1Gossypium barbadense
rna-gnl|WGS_VKGE|Gotom.A05G344700.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
Gh_A05G301500.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Cotton_A_24998Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1Gossypium arboreum
Ghir_D05G031590.1Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
rna-gnl|WGS:JABEZY|Gogos_00002594-RAGossypium gossypioides (D6) genome ISU_v1Gossypium gossypioides
Gbar_D05G031560.1Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1Gossypium barbadense
Gohir.A05G307600.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
Golon.005G332300-1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
rna-gnl|WGS_VKGI|Godar.D05G346900.1Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
rna-gnl|WGS:VKDL|Gobar.D05G327500.1Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
Ghicr24_A05G324700.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
GH_A05G3159Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
rna-gnl|WGS:JABFAD|Gohar_00003633-RAGossypium harknessii (D2-2) genome ISU_v1Gossypium harknessii
Gar05G34870Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
GH_D05G3170Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Ghicr24_D05G308700.1Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
CotAD_56290Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
TURN.05g114950.m01Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
rna-gnl|WGS_VKGI|Godar.A05G341100.2Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
rna-gnl|WGS:JABEZX|Golob_00003584-RAGossypium lobatum (D7) genome ISU_v1Gossypium lobatum
Ghi_A03G06081Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
rna-gnl|WGS:JABFAA|Goari_00003592-RAGossypium aridum (D4) genome ISU_v1Gossypium aridum
CotAD_63149Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
Ghi_A05G18081Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
D5.v1.pred_00003403-RAGossypium raimondii (D5) 'D5-4' genome NSF_v1Gossypium raimondii
Gorai.009G328200.2Gossypium raimondii (D5) genome JGI_v2_a2.1Gossypium raimondii
Grai_05G033680.1Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
XM_012592863.2Gossypium raimondii (D5) 'GPD5lz' genome HAU_v1Gossypium raimondii
Cotton_D_gene_10008748Gossypium raimondii (D5) 'D5-3' genome BGI-CGP-draft_v1Gossypium raimondii
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-Gorai_013200gene-Gorai_013200_D5_ISU_v1Gossypium raimondiigene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-Gorai_00003390-RA_D5_ISU_v1rna-Gorai_00003390-RA_D5_ISU_v1Gossypium raimondiipolypeptide
rna-gnl|WGS:JABEZZ|Gorai_00003390-RArna-Gorai_00003390-RA_D5_ISU_v1-proteinGossypium raimondiipolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-MBA0596378.1cds-MBA0596378.1_D5_ISU_v1Gossypium raimondiiCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-gnl|WGS:JABEZZ|Gorai_00003390-RA-5exon-Gorai_00003390-RA-5_D5_ISU_v1Gossypium raimondiiexon
exon-gnl|WGS:JABEZZ|Gorai_00003390-RA-4exon-Gorai_00003390-RA-4_D5_ISU_v1Gossypium raimondiiexon
exon-gnl|WGS:JABEZZ|Gorai_00003390-RA-3exon-Gorai_00003390-RA-3_D5_ISU_v1Gossypium raimondiiexon
exon-gnl|WGS:JABEZZ|Gorai_00003390-RA-2exon-Gorai_00003390-RA-2_D5_ISU_v1Gossypium raimondiiexon
exon-gnl|WGS:JABEZZ|Gorai_00003390-RA-1exon-Gorai_00003390-RA-1_D5_ISU_v1Gossypium raimondiiexon


Homology
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: hypothetical (protein B456_009G328200 [Gossypium raimondii])

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  252 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 566
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: hypothetical (protein B456_009G328200 [Gossypium raimondii] >gi|763793857|gb|KJB60853.1| hypothetical protein B456_009G328200 [Gossypium raimondii])

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  191 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 505
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: PREDICTED: (transcriptional adapter ADA2a-like [Gossypium raimondii] >gi|763793855|gb|KJB60851.1| hypothetical protein B456_009G328200 [Gossypium raimondii] >gi|763793858|gb|KJB60854.1| hypothetical protein B456_009G328200 [Gossypium raimondii] >gi|763793862|gb|KJB60858.1| hypothetical protein B456_009G328200 [Gossypium raimondii])

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: PREDICTED: (transcriptional adapter ADA2a-like [Gossypium arboreum] >gi|728836391|gb|KHG15834.1| Transcriptional adapter ADA2 [Gossypium arboreum])

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: PREDICTED: (transcriptional adapter ADA2a-like [Gossypium hirsutum])

HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0
Identity = 312/315 (99.05%), Postives = 313/315 (99.37%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIE+KRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEEKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: PREDICTED: (transcriptional adapter ADA2a-like [Gossypium hirsutum])

HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEE QADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLG TTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEETQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGLTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: hypothetical (protein B456_009G328200 [Gossypium raimondii])

HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDS   LCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDS---LCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 565
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: hypothetical (protein GOBAR_AA21323 [Gossypium barbadense])

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 312/339 (92.04%), Postives = 312/339 (92.04%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQ------------------------EARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMT LSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQ                        EARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  272 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTVLSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEPDLLSDFCKDTSLISLVGTSHRIEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 610
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: transcriptional (adapter ADA2a-like isoform X1 [Durio zibethinus] >gi|1269966444|ref|XP_022733545.1| transcriptional adapter ADA2a-like isoform X1 [Durio zibethinus])

HSP 1 Score: 602.053 bits (1551), Expect = 0.000e+0
Identity = 293/315 (93.02%), Postives = 303/315 (96.19%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            M Q KDGIKVEEPQADRSIGEKKPRV T+EEPSMTELSGYNFKRQEFEIEYDNDAE LLADMEFKDTDTKAE ELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPF+RNLSPEE+EIYQR KVFMRFHSKEEH ELLKSVIEEHR VKRIQELQEARAAGCRTAAEANK+IEQKRKKEAEENAQRL+ESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTV+GQ TLSTLDDWDITGFIGADLLSD+EKQLC+EIRILP+HYLSMLQTLSMEIMKGNISKKSDA+NLFKVEPSKVDRVYDMLVKKGI Q 
Sbjct:  253 MVQNKDGIKVEEPQADRSIGEKKPRVSTDEEPSMTELSGYNFKRQEFEIEYDNDAELLLADMEFKDTDTKAEHELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFKRNLSPEEREIYQRCKVFMRFHSKEEHEELLKSVIEEHRTVKRIQELQEARAAGCRTAAEANKYIEQKRKKEAEENAQRLRESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVIGQDTLSTLDDWDITGFIGADLLSDTEKQLCNEIRILPTHYLSMLQTLSMEIMKGNISKKSDAYNLFKVEPSKVDRVYDMLVKKGIAQA 567
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: transcriptional (adapter ADA2a-like isoform X2 [Durio zibethinus])

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 284/304 (93.42%), Postives = 294/304 (96.71%), Query Frame = 0 
Query:   12 EPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            EPQADRSIGEKKPRV T+EEPSMTELSGYNFKRQEFEIEYDNDAE LLADMEFKDTDTKAE ELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPF+RNLSPEE+EIYQR KVFMRFHSKEEH ELLKSVIEEHR VKRIQELQEARAAGCRTAAEANK+IEQKRKKEAEENAQRL+ESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTV+GQ TLSTLDDWDITGFIGADLLSD+EKQLC+EIRILP+HYLSMLQTLSMEIMKGNISKKSDA+NLFKVEPSKVDRVYDMLVKKGI Q 
Sbjct:  230 EPQADRSIGEKKPRVSTDEEPSMTELSGYNFKRQEFEIEYDNDAELLLADMEFKDTDTKAEHELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFKRNLSPEEREIYQRCKVFMRFHSKEEHEELLKSVIEEHRTVKRIQELQEARAAGCRTAAEANKYIEQKRKKEAEENAQRLRESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVIGQDTLSTLDDWDITGFIGADLLSDTEKQLCNEIRILPTHYLSMLQTLSMEIMKGNISKKSDAYNLFKVEPSKVDRVYDMLVKKGIAQA 533
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A0D2UXF9|A0A0D2UXF9_GOSRA (Transcriptional adapter OS=Gossypium raimondii OX=29730 GN=B456_009G328200 PE=4 SV=1)

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  252 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 566
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A0D2SCE1|A0A0D2SCE1_GOSRA (Transcriptional adapter OS=Gossypium raimondii OX=29730 GN=B456_009G328200 PE=4 SV=1)

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A0D2SCD7|A0A0D2SCD7_GOSRA (Transcriptional adapter OS=Gossypium raimondii OX=29730 GN=B456_009G328200 PE=4 SV=1)

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV
Sbjct:  191 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 505
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A5D2QMJ7|A0A5D2QMJ7_GOSTO (Transcriptional adapter OS=Gossypium tomentosum OX=34277 GN=ES332_A05G344700v1 PE=4 SV=1)

HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A5D2ZCS7|A0A5D2ZCS7_GOSMU (Transcriptional adapter OS=Gossypium mustelinum OX=34275 GN=E1A91_A05G335200v1 PE=4 SV=1)

HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A0B0NVH3|A0A0B0NVH3_GOSAR (Transcriptional adapter OS=Gossypium arboreum OX=29729 GN=F383_02993 PE=4 SV=1)

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A1U8PAC3|A0A1U8PAC3_GOSHI (Transcriptional adapter OS=Gossypium hirsutum OX=3635 GN=LOC107957206 PE=4 SV=1)

HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0
Identity = 312/315 (99.05%), Postives = 313/315 (99.37%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIE+KRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEEKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A5J5VXA3|A0A5J5VXA3_GOSBA (Transcriptional adapter OS=Gossypium barbadense OX=3634 GN=ES319_A05G323800v1 PE=4 SV=1)

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMT LSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  252 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTVLSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 566
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A5J5VVM5|A0A5J5VVM5_GOSBA (Transcriptional adapter OS=Gossypium barbadense OX=3634 GN=ES319_A05G323800v1 PE=4 SV=1)

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMT LSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTVLSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: tr|A0A5D2GPF0|A0A5D2GPF0_GOSDA (Transcriptional adapter OS=Gossypium darwinii OX=34276 GN=ES288_A05G341100v1 PE=4 SV=1)

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMT LSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGS GLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEP KVDRVYDMLVKKGIVQV
Sbjct:  254 MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTVLSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSTGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPGKVDRVYDMLVKKGIVQV 568
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: AT3G07740.2 (| ADA2 2A | Chr3:2470014-2472485 REVERSE LENGTH=477 | 201606)

HSP 1 Score: 359.762 bits (922), Expect = 2.790e-122
Identity = 199/316 (62.97%), Postives = 242/316 (76.58%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEP--QADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENA-QRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKES-STVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGI 312
            + Q KD IK+E    Q+DRS+GEKK R+  E+ P +TEL GYN KR+EFEIE+DNDAEQLLADMEFKD+DT AERE KL+VL IYSKRLDERKRRK+F+LERNLLYPD +E +LS EE++IY+  KVF RF SKEEH+EL+K VIEEH+I++RI++LQEAR AGCRT ++AN+FIE+KRKKEAEE+   RL        +GK L   SPRG+ R    L PF  +S   V      S LD WD+ G +GADLLS++EK++C+E RILP HYL ML  L+ EI KG I KKSDA++ FKVEPSKVDRVYDMLV KGI
Sbjct:  163 VPQAKDIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTL--KSPRGLPR---NLHPFGSDSLPKVTPPRIYSGLDTWDVDGLLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKKSDAYSFFKVEPSKVDRVYDMLVHKGI 473
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: AT3G07740.3 (| ADA2 2A | Chr3:2470014-2472635 REVERSE LENGTH=527 | 201606)

HSP 1 Score: 359.762 bits (922), Expect = 1.099e-121
Identity = 199/316 (62.97%), Postives = 242/316 (76.58%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEP--QADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENA-QRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKES-STVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGI 312
            + Q KD IK+E    Q+DRS+GEKK R+  E+ P +TEL GYN KR+EFEIE+DNDAEQLLADMEFKD+DT AERE KL+VL IYSKRLDERKRRK+F+LERNLLYPD +E +LS EE++IY+  KVF RF SKEEH+EL+K VIEEH+I++RI++LQEAR AGCRT ++AN+FIE+KRKKEAEE+   RL        +GK L   SPRG+ R    L PF  +S   V      S LD WD+ G +GADLLS++EK++C+E RILP HYL ML  L+ EI KG I KKSDA++ FKVEPSKVDRVYDMLV KGI
Sbjct:  213 VPQAKDIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTL--KSPRGLPR---NLHPFGSDSLPKVTPPRIYSGLDTWDVDGLLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKKSDAYSFFKVEPSKVDRVYDMLVHKGI 523
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: AT3G07740.1 (| ADA2 2A | Chr3:2470014-2473062 REVERSE LENGTH=548 | 201606)

HSP 1 Score: 359.762 bits (922), Expect = 2.081e-121
Identity = 199/316 (62.97%), Postives = 242/316 (76.58%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEP--QADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENA-QRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKES-STVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGI 312
            + Q KD IK+E    Q+DRS+GEKK R+  E+ P +TEL GYN KR+EFEIE+DNDAEQLLADMEFKD+DT AERE KL+VL IYSKRLDERKRRK+F+LERNLLYPD +E +LS EE++IY+  KVF RF SKEEH+EL+K VIEEH+I++RI++LQEAR AGCRT ++AN+FIE+KRKKEAEE+   RL        +GK L   SPRG+ R    L PF  +S   V      S LD WD+ G +GADLLS++EK++C+E RILP HYL ML  L+ EI KG I KKSDA++ FKVEPSKVDRVYDMLV KGI
Sbjct:  234 VPQAKDIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTL--KSPRGLPR---NLHPFGSDSLPKVTPPRIYSGLDTWDVDGLLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKKSDAYSFFKVEPSKVDRVYDMLVHKGI 544
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: AT3G07740.4 (| ADA2 2A | Chr3:2470014-2473062 REVERSE LENGTH=555 | 201606)

HSP 1 Score: 359.377 bits (921), Expect = 3.993e-121
Identity = 199/316 (62.97%), Postives = 242/316 (76.58%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEP--QADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENA-QRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKES-STVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGI 312
            + Q KD IK+E    Q+DRS+GEKK R+  E+ P +TEL GYN KR+EFEIE+DNDAEQLLADMEFKD+DT AERE KL+VL IYSKRLDERKRRK+F+LERNLLYPD +E +LS EE++IY+  KVF RF SKEEH+EL+K VIEEH+I++RI++LQEAR AGCRT ++AN+FIE+KRKKEAEE+   RL        +GK L   SPRG+ R    L PF  +S   V      S LD WD+ G +GADLLS++EK++C+E RILP HYL ML  L+ EI KG I KKSDA++ FKVEPSKVDRVYDMLV KGI
Sbjct:  241 VPQAKDIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTL--KSPRGLPR---NLHPFGSDSLPKVTPPRIYSGLDTWDVDGLLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKKSDAYSFFKVEPSKVDRVYDMLVHKGI 551
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: AT4G16420.2 (| ADA2 2B | Chr4:9262805-9265775 REVERSE LENGTH=483 | 201606)

HSP 1 Score: 333.183 bits (853), Expect = 6.878e-112
Identity = 176/308 (57.14%), Postives = 227/308 (73.70%), Query Frame = 0 
Query:    8 IKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            +KVE+ Q DRS G KKP V T    S+ ELS YN KR+EF+ EYDNDAEQLLA+MEFK+ DT  E ELKLRVL IYSKRLDERKRRK+FI+ERNLLYP+PFE++LS EEK   +R  VFMRFHSKEEH ELL++V+ E+R+VKR+++L+EA+ AGCR+ AEA +++ +KRK+E EE   R KES Q G              + G  G +P  + SS        S ++D D+ GF  + LLS+SEK+LCSE++++P  YL M Q +S EI KGN++KKSDA++LFK++P+KVDRVYDMLVKKGI Q+
Sbjct:  198 VKVEDTQKDRSFGGKKP-VSTSVNNSLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRIYSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFGQ-------------IAGEMGSRPPVQASS--------SYVNDLDLIGFTESQLLSESEKRLCSEVKLVPPVYLQMQQVMSHEIFKGNVTKKSDAYSLFKIDPTKVDRVYDMLVKKGIAQL 483
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: AT4G16420.1 (| ADA2 2B | Chr4:9262805-9265775 REVERSE LENGTH=487 | 201606)

HSP 1 Score: 328.176 bits (840), Expect = 7.963e-110
Identity = 176/312 (56.41%), Postives = 227/312 (72.76%), Query Frame = 0 
Query:    8 IKVEEPQ----ADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            +KVE+ Q     DRS G KKP V T    S+ ELS YN KR+EF+ EYDNDAEQLLA+MEFK+ DT  E ELKLRVL IYSKRLDERKRRK+FI+ERNLLYP+PFE++LS EEK   +R  VFMRFHSKEEH ELL++V+ E+R+VKR+++L+EA+ AGCR+ AEA +++ +KRK+E EE   R KES Q G              + G  G +P  + SS        S ++D D+ GF  + LLS+SEK+LCSE++++P  YL M Q +S EI KGN++KKSDA++LFK++P+KVDRVYDMLVKKGI Q+
Sbjct:  198 VKVEDTQKESFVDRSFGGKKP-VSTSVNNSLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRIYSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFGQ-------------IAGEMGSRPPVQASS--------SYVNDLDLIGFTESQLLSESEKRLCSEVKLVPPVYLQMQQVMSHEIFKGNVTKKSDAYSLFKIDPTKVDRVYDMLVKKGIAQL 487
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: AT4G16420.3 (| ADA2 2B | Chr4:9262805-9265775 REVERSE LENGTH=486 | 201606)

HSP 1 Score: 327.791 bits (839), Expect = 1.058e-109
Identity = 176/312 (56.41%), Postives = 227/312 (72.76%), Query Frame = 0 
Query:    8 IKVEEPQ----ADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            +KVE+ Q     DRS G KKP V T    S+ ELS YN KR+EF+ EYDNDAEQLLA+MEFK+ DT  E ELKLRVL IYSKRLDERKRRK+FI+ERNLLYP+PFE++LS EEK   +R  VFMRFHSKEEH ELL++V+ E+R+VKR+++L+EA+ AGCR+ AEA +++ +KRK+E EE   R KES Q G              + G  G +P  + SS        S ++D D+ GF  + LLS+SEK+LCSE++++P  YL M Q +S EI KGN++KKSDA++LFK++P+KVDRVYDMLVKKGI Q+
Sbjct:  197 VKVEDTQKESFVDRSFGGKKP-VSTSVNNSLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRIYSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFGQ-------------IAGEMGSRPPVQASS--------SYVNDLDLIGFTESQLLSESEKRLCSEVKLVPPVYLQMQQVMSHEIFKGNVTKKSDAYSLFKIDPTKVDRVYDMLVKKGIAQL 486
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q9SFD5|TAD2A_ARATH (Transcriptional adapter ADA2a OS=Arabidopsis thaliana OX=3702 GN=ADA2A PE=1 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 2.024e-120
Identity = 199/316 (62.97%), Postives = 242/316 (76.58%), Query Frame = 0 
Query:    1 MAQIKDGIKVEEP--QADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENA-QRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKES-STVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGI 312
            + Q KD IK+E    Q+DRS+GEKK R+  E+ P +TEL GYN KR+EFEIE+DNDAEQLLADMEFKD+DT AERE KL+VL IYSKRLDERKRRK+F+LERNLLYPD +E +LS EE++IY+  KVF RF SKEEH+EL+K VIEEH+I++RI++LQEAR AGCRT ++AN+FIE+KRKKEAEE+   RL        +GK L   SPRG+ R    L PF  +S   V      S LD WD+ G +GADLLS++EK++C+E RILP HYL ML  L+ EI KG I KKSDA++ FKVEPSKVDRVYDMLV KGI
Sbjct:  234 VPQAKDIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTL--KSPRGLPR---NLHPFGSDSLPKVTPPRIYSGLDTWDVDGLLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKKSDAYSFFKVEPSKVDRVYDMLVHKGI 544
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q75LL6|TADA2_ORYSJ (Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADA2 PE=2 SV=2)

HSP 1 Score: 360.147 bits (923), Expect = 2.644e-120
Identity = 188/323 (58.20%), Postives = 231/323 (71.52%), Query Frame = 0 
Query:    1 MAQIKDGI---KVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGI----------VRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKK 310
            + Q KDG    KVE+   DRSIG KKPR   +E PS+TELSGYN KR EF+ EYDNDAEQ LA+MEFK+TD++ +RELKLRVL IY  RLDERKRRK+FILERNLL+P+P E++L+ E+KE+Y RYKVFMRF SKEEH  L++SV+EE +I +RIQELQE R+AGCRT AEA   IEQKRKKE E NAQ+ KES Q   + KV +H + R +           +G   L    ++S    G       DDWDI GF GA+LLS SEK LC + R+LP+HYL M + L  EI KG+++KK DAH LFKV+P+KVD VYDM+ KK
Sbjct:  236 VGQFKDGANVAKVEDGHVDRSIGVKKPRYSADEGPSLTELSGYNSKRHEFDPEYDNDAEQALAEMEFKETDSETDRELKLRVLRIYLSRLDERKRRKEFILERNLLFPNPLEKDLTNEDKEVYHRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQELQECRSAGCRTLAEAKIHIEQKRKKEHEVNAQKAKESGQLLSNTKV-VHKTNRPMKIESDGNLDQKKGGASLDSTGRDSPKTTGHAGTKHWDDWDIVGFPGAELLSTSEKNLCCQNRLLPNHYLKMQEVLMQEIFKGSVAKKEDAHVLFKVDPAKVDNVYDMVTKK 557
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q9ATB4|TAD2B_ARATH (Transcriptional adapter ADA2b OS=Arabidopsis thaliana OX=3702 GN=ADA2B PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 7.743e-109
Identity = 176/312 (56.41%), Postives = 227/312 (72.76%), Query Frame = 0 
Query:    8 IKVEEPQ----ADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIVQV 315
            +KVE+ Q     DRS G KKP V T    S+ ELS YN KR+EF+ EYDNDAEQLLA+MEFK+ DT  E ELKLRVL IYSKRLDERKRRK+FI+ERNLLYP+PFE++LS EEK   +R  VFMRFHSKEEH ELL++V+ E+R+VKR+++L+EA+ AGCR+ AEA +++ +KRK+E EE   R KES Q G              + G  G +P  + SS        S ++D D+ GF  + LLS+SEK+LCSE++++P  YL M Q +S EI KGN++KKSDA++LFK++P+KVDRVYDMLVKKGI Q+
Sbjct:  198 VKVEDTQKESFVDRSFGGKKP-VSTSVNNSLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRIYSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFGQ-------------IAGEMGSRPPVQASS--------SYVNDLDLIGFTESQLLSESEKRLCSEVKLVPPVYLQMQQVMSHEIFKGNVTKKSDAYSLFKIDPTKVDRVYDMLVKKGIAQL 487
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q02336|ADA2_YEAST (Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ADA2 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.467e-27
Identity = 94/293 (32.08%), Postives = 145/293 (49.49%), Query Frame = 0 
Query:   24 PRVFTEEEPSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLL---YPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPS-GKVLLHGSPRGIVRGSPGLQP---FSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMK--GNISKKSDAHNLFKVEPSKVDRVYDML 307
            PR      PS  E+ G+   R EFE E++N+AE  + DM F+  D   + ELK  +L IY+ RL  R  +K  + E +L+        ++  S E KE+Y R K F R  + ++  E  K ++EE     RIQ+LQE R+ G  T     K+   +R K+A     R+    + G S    L  G+ R   R +   +    +S+  S   G+    T+ D  I       LLS+ E+QLC +++ILP  YL + + +  E++K  GN+S KS    L  ++P K +R+YD  
Sbjct:  149 PRKPMASVPSCHEVQGFMPGRLEFETEFENEAEGPVKDMVFEPDDQPLDIELKFAILDIYNSRLTTRAEKKRLLFENHLMDYRKLQAIDKKRSKEAKELYNRIKPFARVMTAQDFEEFSKDILEELHCRARIQQLQEWRSNGLTTLEAGLKY---ERDKQA-----RISSFEKFGASTAASLSEGNSR--YRSNSAHRSNAEYSQNYSENGGRKKNMTISD--IQHAPDYALLSNDEQQLCIQLKILPKPYLVLKEVMFRELLKTGGNLS-KSACRELLNIDPIKANRIYDFF 428
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q59WH0|ADA2_CANAL (Transcriptional adapter 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ADA2 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.802e-25
Identity = 90/302 (29.80%), Postives = 143/302 (47.35%), Query Frame = 0 
Query:   32 PSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERNL------SPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRG------------SPGLQP-FSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGN-ISKKSDAHNLFKVEPSKVDRVYDMLVKKGIV 313
            P   E+ GY   R EF+ E +N+AE  + DM F   D+  + +LKL +L IY+ RL  R  RK  ++  +LL    + +N+      S EEK++ ++   F+R  + E+     + ++ E +   +IQ+LQ  R  G  T  +  KF + K  + A  + QR+     +G       H    G+  G            SP  QP F  +S+T      +S   D+        +LLS  EKQLC+ +RILP  YL++   L  E +K N + KK DA    K++ +K  ++Y+  V  G  
Sbjct:  162 PLCHEIQGYMPGRLEFDHEAENEAEIPIKDMVFDPEDSANDIDLKLTILDIYNSRLTTRAERKRVMILNHLL---DYRKNIGSDKRKSKEEKDLLKKINAFIRILTPEDFESFSRDLLTELKCRMKIQQLQTWRRNGITTLEDGAKFEKDKVIRAA--HYQRMGNGTGSG------RHSQTPGLTNGNSFNGNGHRNKFSP--QPEFRSKSTTARAPLDISHAADF--------ELLSAEEKQLCATLRILPKPYLAIKNQLMREAVKNNGVLKKKDARQALKIDVNKASKIYEFFVHMGWC 442
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q3SZP8|TAD2A_BOVIN (Transcriptional adapter 2-alpha OS=Bos taurus OX=9913 GN=TADA2A PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.889e-24
Identity = 77/281 (27.40%), Postives = 136/281 (48.40%), Query Frame = 0 
Query:   36 ELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPF---ERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIV 313
            +++GY   R +F  E+DN AE  L D++F + D+     LK+ V+ IY  RL ER+RRK  I +  L+    F   ER    E +++Y+  + F R     EH + ++S   E  + + I+ LQE R AG      A  +   K+ +E E    RLK ++ +     +    + +  +R    +      S  +   +   +    ++TG  G + L++ EK+LC  +R++P  YL     L  E  K    + + A  L K++ +K  ++YD L+++G +
Sbjct:  164 DMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE----RLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSVPMTSNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYI 440
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|O75478|TAD2A_HUMAN (Transcriptional adapter 2-alpha OS=Homo sapiens OX=9606 GN=TADA2A PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 5.237e-24
Identity = 77/281 (27.40%), Postives = 136/281 (48.40%), Query Frame = 0 
Query:   36 ELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPF---ERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIV 313
            +++GY   R +F  E+DN AE  L D++F + D+     LK+ V+ IY  RL ER+RRK  I +  L+    F   ER    E +++Y+  + F R     EH + ++S   E  + + I+ LQE R AG      A  +   K+ +E E    RLK ++ +     +    + +  +R    +      S  +   +   +    ++TG  G + L++ EK+LC  +R++P  YL     L  E  K    + + A  L K++ +K  ++YD L+++G +
Sbjct:  164 DMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE----RLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYI 440
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q6AYE3|TAD2A_RAT (Transcriptional adapter 2-alpha OS=Rattus norvegicus OX=10116 GN=Tada2a PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.372e-24
Identity = 77/281 (27.40%), Postives = 136/281 (48.40%), Query Frame = 0 
Query:   36 ELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPF---ERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIV 313
            +++GY   R +F  E+DN AE  L D++F + D+     LK+ V+ IY  RL ER+RRK  I +  L+    F   ER    E +++Y+  + F R     EH + ++S   E  + + I+ LQE R AG      A  +   K+ +E E    RLK ++ +     +    + +  +R    +      S  +   +   +    ++TG  G + L++ EK+LC  +R++P  YL     L  E  K    + + A  L K++ +K  ++YD L+++G +
Sbjct:  164 DMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE----RLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQVVRLVPGAYLEYKSALLNECHKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYI 440
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q8CHV6|TAD2A_MOUSE (Transcriptional adapter 2-alpha OS=Mus musculus OX=10090 GN=Tada2a PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.498e-24
Identity = 77/281 (27.40%), Postives = 136/281 (48.40%), Query Frame = 0 
Query:   36 ELSGYNFKRQEFEIEYDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPF---ERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKVDRVYDMLVKKGIV 313
            +++GY   R +F  E+DN AE  L D++F + D+     LK+ V+ IY  RL ER+RRK  I +  L+    F   ER    E +++Y+  + F R     EH + ++S   E  + + I+ LQE R AG      A  +   K+ +E E    RLK ++ +     +    + +  +R    +      S  +   +   +    ++TG  G + L++ EK+LC  +R++P  YL     L  E  K    + + A  L K++ +K  ++YD L+++G +
Sbjct:  164 DMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE----RLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQVVRLVPGAYLEYKSALLNECHKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYI 440
[Close]
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Match: sp|Q9P7J7|ADA2_SCHPO (Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ada2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.446e-21
Identity = 87/291 (29.90%), Postives = 135/291 (46.39%), Query Frame = 0 
Query:   32 PSMTELSGYNFKRQEFEIEYDNDAEQLLADMEFKDT---DTKAERELKLRVLHIYSKRLDERKRRKDFILERNLLYPDPFERN---LSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVKRIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKVLLH-------GSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLSDSEKQLCSEIRILPSHYLSM-LQTLSMEIMKGNISKKSDAHNLFK-VEPSKVDRVYDML 307
            P   E+ GY   R EF+ EY N+AE  + DM F D      K E +LKL +L+IY+ RL  R  RK  I   NLL     + N   +S EE+ +  + K F R  +  ++++ + S  E+  + K+I +LQE R  G  T       +EQ  K E  +  Q+   S  +    K L H        S    VR    + P    + T+   +                 LLS+ E+ LCS+++I P  +L++    +S  +      +K+DA NLFK ++ +KV++VYD  
Sbjct:  158 PQCHEIQGYMPGRLEFDQEYMNEAELPIKDMNFDDDLHESAKHEMQLKLTMLNIYNSRLTRRAVRKQTIFNHNLLDYRRLQANEKRMSKEERNLLNKTKAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTT-------LEQGHKYE-RDKTQKFLLSKASASYDKQLRHVKSFNQTTSAPFQVRDIQKIVPRKPATPTMFSASA-------------DRQLLSEDEQALCSKLQIFPKPFLALKFALISASLTSKKPFQKTDAVNLFKHLDANKVEQVYDFF 427
The following BLAST results are available for this feature:
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Analysis Date: 2021-08-24 (BLASTP of ISU_v1 Gossypium_raimondii D5 proteins vs NCBI nr )
Total hits: 10
Match NameE-valueIdentityDescription
hypothetical0.000e+0100.00protein B456_009G328200 [Gossypium raimondii][more]
hypothetical0.000e+0100.00protein B456_009G328200 [Gossypium raimondii] >gi|... [more]
PREDICTED:0.000e+0100.00transcriptional adapter ADA2a-like [Gossypium raim... [more]
PREDICTED:0.000e+099.37transcriptional adapter ADA2a-like [Gossypium arbo... [more]
PREDICTED:0.000e+099.05transcriptional adapter ADA2a-like [Gossypium hirs... [more]
PREDICTED:0.000e+099.05transcriptional adapter ADA2a-like [Gossypium hirs... [more]
hypothetical0.000e+099.05protein B456_009G328200 [Gossypium raimondii][more]
hypothetical0.000e+092.04protein GOBAR_AA21323 [Gossypium barbadense][more]
transcriptional0.000e+093.02adapter ADA2a-like isoform X1 [Durio zibethinus] >... [more]
transcriptional0.000e+093.42adapter ADA2a-like isoform X2 [Durio zibethinus][more]
back to top
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Analysis Date: 2021-08-24 (BLASTP of ISU_v1 Gossypium_raimondii D5 proteins vs UniProt TrEMBL )
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0D2UXF9|A0A0D2UXF9_GOSRA0.000e+0100.00Transcriptional adapter OS=Gossypium raimondii OX=... [more]
tr|A0A0D2SCE1|A0A0D2SCE1_GOSRA0.000e+0100.00Transcriptional adapter OS=Gossypium raimondii OX=... [more]
tr|A0A0D2SCD7|A0A0D2SCD7_GOSRA0.000e+0100.00Transcriptional adapter OS=Gossypium raimondii OX=... [more]
tr|A0A5D2QMJ7|A0A5D2QMJ7_GOSTO0.000e+099.37Transcriptional adapter OS=Gossypium tomentosum OX... [more]
tr|A0A5D2ZCS7|A0A5D2ZCS7_GOSMU0.000e+099.37Transcriptional adapter OS=Gossypium mustelinum OX... [more]
tr|A0A0B0NVH3|A0A0B0NVH3_GOSAR0.000e+099.37Transcriptional adapter OS=Gossypium arboreum OX=2... [more]
tr|A0A1U8PAC3|A0A1U8PAC3_GOSHI0.000e+099.05Transcriptional adapter OS=Gossypium hirsutum OX=3... [more]
tr|A0A5J5VXA3|A0A5J5VXA3_GOSBA0.000e+099.05Transcriptional adapter OS=Gossypium barbadense OX... [more]
tr|A0A5J5VVM5|A0A5J5VVM5_GOSBA0.000e+099.05Transcriptional adapter OS=Gossypium barbadense OX... [more]
tr|A0A5D2GPF0|A0A5D2GPF0_GOSDA0.000e+099.05Transcriptional adapter OS=Gossypium darwinii OX=3... [more]
back to top
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Analysis Date: 2021-08-25 (BLASTP of ISU v1 Gossypium raimondii D5 proteins vs arabidopsis Araport11)
Total hits: 7
Match NameE-valueIdentityDescription
AT3G07740.22.790e-12262.97| ADA2 2A | Chr3:2470014-2472485 REVERSE LENGTH=47... [more]
AT3G07740.31.099e-12162.97| ADA2 2A | Chr3:2470014-2472635 REVERSE LENGTH=52... [more]
AT3G07740.12.081e-12162.97| ADA2 2A | Chr3:2470014-2473062 REVERSE LENGTH=54... [more]
AT3G07740.43.993e-12162.97| ADA2 2A | Chr3:2470014-2473062 REVERSE LENGTH=55... [more]
AT4G16420.26.878e-11257.14| ADA2 2B | Chr4:9262805-9265775 REVERSE LENGTH=48... [more]
AT4G16420.17.963e-11056.41| ADA2 2B | Chr4:9262805-9265775 REVERSE LENGTH=48... [more]
AT4G16420.31.058e-10956.41| ADA2 2B | Chr4:9262805-9265775 REVERSE LENGTH=48... [more]
back to top
BLAST of rna-gnl|WGS:JABEZZ|Gorai_00003390-RA vs.
Analysis Date: 2021-08-25 (BLASTP of ISU v1.0 Gossypium raimondii D5 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9SFD5|TAD2A_ARATH2.024e-12062.97Transcriptional adapter ADA2a OS=Arabidopsis thali... [more]
sp|Q75LL6|TADA2_ORYSJ2.644e-12058.20Transcriptional adapter ADA2 OS=Oryza sativa subsp... [more]
sp|Q9ATB4|TAD2B_ARATH7.743e-10956.41Transcriptional adapter ADA2b OS=Arabidopsis thali... [more]
sp|Q02336|ADA2_YEAST2.467e-2732.08Transcriptional adapter 2 OS=Saccharomyces cerevis... [more]
sp|Q59WH0|ADA2_CANAL1.802e-2529.80Transcriptional adapter 2 OS=Candida albicans (str... [more]
sp|Q3SZP8|TAD2A_BOVIN4.889e-2427.40Transcriptional adapter 2-alpha OS=Bos taurus OX=9... [more]
sp|O75478|TAD2A_HUMAN5.237e-2427.40Transcriptional adapter 2-alpha OS=Homo sapiens OX... [more]
sp|Q6AYE3|TAD2A_RAT6.372e-2427.40Transcriptional adapter 2-alpha OS=Rattus norvegic... [more]
sp|Q8CHV6|TAD2A_MOUSE6.498e-2427.40Transcriptional adapter 2-alpha OS=Mus musculus OX... [more]
sp|Q9P7J7|ADA2_SCHPO7.446e-2129.90Transcriptional adapter 2 OS=Schizosaccharomyces p... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for ISU v1.0 Gossypium raimondii D5 proteins
Date Performed: 2021-08-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 230..314
e-value: 5.0E-20
score: 73.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 7..314
IPR034318Transcriptional adapter ADA2, plantsPANTHERPTHR12374:SF60TRANSCRIPTIONAL ADAPTER ADA2Bcoord: 7..314
IPR007526SWIRM domainPROSITEPS50934SWIRMcoord: 229..315
score: 10.90199
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 219..313

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-Gorai_00003390-RA_D5_ISU_v1 ID=rna-Gorai_00003390-RA_D5_ISU_v1; Name=rna-gnl|WGS:JABEZZ|Gorai_00003390-RA; organism=Gossypium raimondii; type=mRNA; length=948bp
ATGGCCCAGATTAAAGATGGCATTAAAGTAGAAGAACCTCAAGCAGACAG
GAGCATTGGTGAGAAAAAGCCTAGGGTTTTCACTGAGGAGGAACCGTCTA
TGACTGAGCTGAGTGGCTATAATTTCAAGAGGCAGGAATTTGAGATTGAA
TATGATAATGATGCGGAGCAATTATTGGCAGATATGGAATTTAAGGATAC
TGACACCAAGGCTGAGCGTGAATTGAAGTTGCGTGTATTACATATCTACT
CAAAAAGGCTTGATGAGAGGAAGCGTAGGAAGGACTTTATTTTGGAAAGA
AATTTACTTTACCCTGATCCATTCGAGAGAAACCTCTCACCTGAGGAGAA
GGAGATATATCAGCGTTACAAGGTGTTTATGCGCTTCCACTCGAAAGAAG
AGCATCGGGAGTTGCTTAAGAGTGTCATAGAGGAACATCGGATTGTCAAA
AGAATACAAGAACTTCAGGAAGCTCGAGCTGCTGGTTGCCGAACCGCTGC
TGAAGCCAATAAATTTATTGAACAGAAGAGGAAAAAGGAAGCTGAAGAAA
ATGCCCAGAGACTGAAGGAAAGTGTACAAGCTGGTCCTAGTGGTAAAGTG
TTATTGCATGGCAGTCCGAGGGGTATTGTGAGGGGTTCCCCTGGTTTACA
ACCTTTTAGTAAAGAATCTTCAACTGTCTTAGGACAAACTACATTAAGCA
CTTTGGATGATTGGGATATCACTGGATTCATAGGAGCCGATTTATTGTCT
GATTCTGAGAAACAGCTTTGCAGTGAGATCAGAATACTGCCTTCACATTA
TCTCTCAATGTTGCAAACCTTATCAATGGAGATTATGAAGGGAAATATTA
GCAAGAAATCTGATGCTCACAACCTGTTCAAAGTTGAACCGAGCAAGGTG
GATAGGGTGTATGATATGTTGGTAAAAAAGGGGATTGTTCAAGTTTGA
back to top

protein sequence of rna-Gorai_00003390-RA_D5_ISU_v1

>rna-Gorai_00003390-RA_D5_ISU_v1 ID=rna-Gorai_00003390-RA_D5_ISU_v1; Name=rna-Gorai_00003390-RA_D5_ISU_v1; organism=Gossypium raimondii; type=polypeptide; length=315bp
MAQIKDGIKVEEPQADRSIGEKKPRVFTEEEPSMTELSGYNFKRQEFEIE
YDNDAEQLLADMEFKDTDTKAERELKLRVLHIYSKRLDERKRRKDFILER
NLLYPDPFERNLSPEEKEIYQRYKVFMRFHSKEEHRELLKSVIEEHRIVK
RIQELQEARAAGCRTAAEANKFIEQKRKKEAEENAQRLKESVQAGPSGKV
LLHGSPRGIVRGSPGLQPFSKESSTVLGQTTLSTLDDWDITGFIGADLLS
DSEKQLCSEIRILPSHYLSMLQTLSMEIMKGNISKKSDAHNLFKVEPSKV
DRVYDMLVKKGIVQV
back to top

mRNA from alignment at Chr09:25521364..25523923-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-Gorai_00003390-RA_D5_ISU_v1 ID=rna-Gorai_00003390-RA_D5_ISU_v1; Name=rna-gnl|WGS:JABEZZ|Gorai_00003390-RA; organism=Gossypium raimondii; type=mRNA; length=2560bp; location=Sequence derived from: Chr09:25521364..25523923- (Gossypium raimondii
TCCCATATTGATTCAAGGAGTGGTGGTAACACATTCCTAGGTACTGGTAA
AAAGACCTCCAACATGGCCCAGATTAAAGATGGCATTAAAGTAGAAGGTA
TGCTCTCTCATTTTGTTGCACATCATGACTGTTGCTTGTGACTTTACGTT
CTGCATGAAGTCATTGACTATTGCCTGCATGGAAATGCCAATCTACCTAA
TGATGGTAGTCAGTCTGTAACTGTTGCAAAAGGTGGCTTATTCTGAAATG
CTAATTAATTATTTTTCTATCTGTAAAGTGAGTTAGAGTTTGTTGAGTTA
AGCAACTTCTTCTTTTCCTTTTCTTTTGTTATTATTTTTAATTTTGGTGA
TTAATATGATGTAAGTTGTTGGTCATGTTCTGTGGATTTGTTATGCAAAT
ACTCTAACACCGTTTTTCTTAAACCTTTTTCTTAGAACCTCAAGCAGACA
GGAGCATTGGTGAGAAAAAGCCTAGGGTTTTCACTGAGGAGGAACCGTCT
ATGACTGAGCTGAGTGGCTATAATTTCAAGAGGCAGGAATTTGAGATTGA
ATATGATAATGATGCGGAGCAATTATTGGCAGATATGGAATTTAAGGATA
CTGACACCAAGGCTGAGCGTGAATTGAAGTTGCGTGTATTACATATCTAC
TCAAAAAGGTATTTATCTACAACAATGTGTATGCATGTTGTCTATATTCT
TGACATGGAAAAGGTTGGTGATCATCAGCATTTTTCAATAAAAGGGTCTG
AGAGGGAAGTATAGGAAGTGGCAGTTCTTGAAGAAAAAGATAACTGTGTT
CTTGATCAATTATAATATACTTTCTGATCTTTCTTACATATATACAATCT
CGATACGTAGAATGAAGGAATTTCCTAAACACCTAATCTTGGTTGGAAAA
CTAATTGAAGCTCCTCTTAGGTGTTAAGAACAAAACTTTGTGTATGAGTT
TTCAACTTCATCACCATCAAATATTAGGATAGAACTTTCCTATAATGTCA
TGACAATTTGGACTTGATTTCAGAATCTGTCTCTACATTAGATCTTGAGT
GCTGTTGGAGATTTTTAGTGCATTCAAGCTGAGTGATTTGTGCTTGTGTT
CTTTCATTTAGACAGCTCTATGTATATCATTAGAGCTGTATGTCTTATGT
GTCTGCTTTTATATTGTCAATTGGCTTTACTAGTAGTTTTAACTTAGTTA
TAACTGATTGGAAAGATGAAACAGTCTTGTAGCATACCATAGTCTGGCAT
TCAATACTGTGCCACATACTACAACTTATGTTGAATCCTCTATTGTTATG
TTTGTATCAAATTTGAGAGATTTATGGTATGGTGTTTTATCAACAGGCTT
GATGAGAGGAAGCGTAGGAAGGACTTTATTTTGGAAAGAAATTTACTTTA
CCCTGATCCATTCGAGAGAAACCTCTCACCTGAGGAGAAGGAGATATATC
AGCGTTACAAGGTGTTTATGCGCTTCCACTCGAAAGAAGAGCATCGGGAG
TTGCTTAAGAGTGTCATAGAGGAACATCGGATTGTCAAAAGAATACAAGA
ACTTCAGGTTAAATGCTTGCTTTGTGCTGACTTTGTATGCTTATCTGCTG
CTTTCATGGACTTTGTAGGTTTCCACAATGAAAATTAGTTTTCAAATGAG
ATTGAAGTTTGATTACATTTTTTTCCTGTTCTGGGAGCGCTGAAGCCGAA
TATTAGGAACTAGAAATCTATGCACCTTTTGACTTGGTTTTGGCTTTCAT
CTTTTAATCATATAGTTGTATTTCTTCATTTCAAATGGTTCAATTCCACA
GTGATTGCTATCCCTTGGGGCTGAACCTCCAAATACAACTATTTAAGCAT
CAAAATTTTGGAACATTATTCAGGTGAATTTATCTGCAGGAAGCTCGAGC
TGCTGGTTGCCGAACCGCTGCTGAAGCCAATAAATTTATTGAACAGAAGA
GGAAAAAGGAAGCTGAAGAAAATGCCCAGAGACTGAAGGAAAGTGTACAA
GCTGGTCCTAGTGGTAAAGTGTTATTGCATGGCAGTCCGAGGGGTATTGT
GAGGGGTTCCCCTGGTTTACAACCTTTTAGTAAAGAATCTTCAACTGTCT
TAGGACAAACTACATTAAGCACTTTGGATGATTGGGATATCACTGGATTC
ATAGGAGCCGATTTATTGTCTGATTCTGTAAGGATACCCTCCCTACACTG
TTGTACATCGCATTGACATACGGTTATCTTTTGCAACCCCAAGTTTAAGT
AATTAACTGTCAAACTTTGGGGATACAGGTGAAACATGAAGTAGCATAGA
GTTTTATTGGAAACTATTTGTGTATATTATTTCGGATTTTGGTTCTCTTA
TAATGTGCTTGTGTGCAGGAGAAACAGCTTTGCAGTGAGATCAGAATACT
GCCTTCACATTATCTCTCAATGTTGCAAACCTTATCAATGGAGATTATGA
AGGGAAATATTAGCAAGAAATCTGATGCTCACAACCTGTTCAAAGTTGAA
CCGAGCAAGGTGGATAGGGTGTATGATATGTTGGTAAAAAAGGGGATTGT
TCAAGTTTGA
back to top

Coding sequence (CDS) from alignment at Chr09:25521364..25523923-

>rna-Gorai_00003390-RA_D5_ISU_v1 ID=rna-Gorai_00003390-RA_D5_ISU_v1; Name=rna-gnl|WGS:JABEZZ|Gorai_00003390-RA; organism=Gossypium raimondii; type=CDS; length=948bp; location=Sequence derived from: Chr09:25521364..25523923- (Gossypium raimondii
ATGGCCCAGATTAAAGATGGCATTAAAGTAGAAGAACCTCAAGCAGACAG
GAGCATTGGTGAGAAAAAGCCTAGGGTTTTCACTGAGGAGGAACCGTCTA
TGACTGAGCTGAGTGGCTATAATTTCAAGAGGCAGGAATTTGAGATTGAA
TATGATAATGATGCGGAGCAATTATTGGCAGATATGGAATTTAAGGATAC
TGACACCAAGGCTGAGCGTGAATTGAAGTTGCGTGTATTACATATCTACT
CAAAAAGGCTTGATGAGAGGAAGCGTAGGAAGGACTTTATTTTGGAAAGA
AATTTACTTTACCCTGATCCATTCGAGAGAAACCTCTCACCTGAGGAGAA
GGAGATATATCAGCGTTACAAGGTGTTTATGCGCTTCCACTCGAAAGAAG
AGCATCGGGAGTTGCTTAAGAGTGTCATAGAGGAACATCGGATTGTCAAA
AGAATACAAGAACTTCAGGAAGCTCGAGCTGCTGGTTGCCGAACCGCTGC
TGAAGCCAATAAATTTATTGAACAGAAGAGGAAAAAGGAAGCTGAAGAAA
ATGCCCAGAGACTGAAGGAAAGTGTACAAGCTGGTCCTAGTGGTAAAGTG
TTATTGCATGGCAGTCCGAGGGGTATTGTGAGGGGTTCCCCTGGTTTACA
ACCTTTTAGTAAAGAATCTTCAACTGTCTTAGGACAAACTACATTAAGCA
CTTTGGATGATTGGGATATCACTGGATTCATAGGAGCCGATTTATTGTCT
GATTCTGAGAAACAGCTTTGCAGTGAGATCAGAATACTGCCTTCACATTA
TCTCTCAATGTTGCAAACCTTATCAATGGAGATTATGAAGGGAAATATTA
GCAAGAAATCTGATGCTCACAACCTGTTCAAAGTTGAACCGAGCAAGGTG
GATAGGGTGTATGATATGTTGGTAAAAAAGGGGATTGTTCAAGTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR034318ADA2_plants
IPR007526SWIRM
IPR009057Homeodomain-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
GO:0035065obsolete regulation of histone acetylation
Vocabulary: Molecular Function
TermDefinition
GO:0003713transcription coactivator activity
GO:0005515protein binding